Raphanus sativus (radish): 108849836
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Entry
108849836 CDS
T06014
Name
(RefSeq) zinc finger protein NUTCRACKER
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108849836
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108849836
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
Motif
Other DBs
NCBI-GeneID:
108849836
NCBI-ProteinID:
XP_018478946
UniProt:
A0A6J0N4F4
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Position
4:complement(18739154..18741804)
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AA seq
461 aa
AA seq
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MTGEVLKTVSSGSAFAPSSSTLDHDESLINPPLVKKKRNLPGNPDPEAEVIALSPKTLMA
TNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHDPARA
LGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVHSDYKAHSKTCGTREYRCDCGTIFSRRDS
FITHRAFCDALAEETAKINAASHLNGLSAGGAVGMNLNYQYLMGTLNPQLQPFVPQAPTN
QNHHHHFLPPPPSSSSSLSLWMGQDIPTSQTQPQDYEWVFGNAKAASGCINNNHDGLVTQ
TANASSTTTATLSVPSLFSSDQTQSPNANVNLSATALLQKAAEIGASSTTPTSTNPSAFL
KSFPLKSSDQTTTSYDGSEKFFALFGTNNNIGVVSNSHDQEIENVRNDVTVASAMDELQN
YPWKRRKVDGGGEGGGGGQTRDFLGVGVQTLCHPSSINGWI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtgaagttcttaagactgtttctagcggatcagcatttgctccgagctcatct
actctggatcatgatgaatctctcatcaatcctcctcttgttaagaagaagagaaatctc
cctggaaatcctgatccggaagctgaagtaatagctttatctcccaagaccttgatggct
acgaatcggttcctctgcgaggtctgtggtaaaggtttccaaagagaccagaacttacag
cttcatcgtcgaggacataatcttccatggaaactaaagcagaggacaagtaaagaagtg
aggaaacgtgtctatgtttgcccggagaagacttgtgtccaccatgaccctgctagagct
ctgggcgatctcaccggtatcaaaaaacatttctgtaggaaacacggcgaaaagaagtgg
acgtgcgagaaatgtgccaagagatacgctgttcattctgattataaagctcattctaag
acttgtggtactagagagtaccgttgcgactgtggcaccattttctccaggcgagacagc
ttcatcacccatagagcattttgcgatgccttagctgaagaaaccgccaaaataaacgca
gcatctcatcttaacggtttatccgccggtggagccgtaggaatgaatctgaactatcaa
tatctcatgggaacactcaacccacagcttcaaccatttgtaccgcaagcgccaacaaat
caaaaccaccatcaccattttctaccgccacctccatcatcctcttcctccctctcccta
tggatgggacaagacatcccaacgtctcaaacgcaaccgcaagactacgagtgggttttc
ggaaacgctaaggctgcgtccgggtgcattaataataatcacgatggcctcgttacacag
accgcaaacgccagctcgaccactactgctactctctctgtcccttctttgttcagcagt
gaccagacacaaagcccaaacgcaaacgtgaatttgtccgccactgcgttgctacaaaaa
gcggctgaaattggcgccagttcaacgacgccaacgagcactaacccatcggcgtttcta
aagagtttcccgctaaagtcctccgaccagaccacgactagttatgacggcagtgaaaag
ttctttgctttgttcggaactaacaacaacattggagtagtgagcaatagtcatgatcag
gagattgagaacgttagaaacgacgttacggttgcgtctgcgatggatgaactacagaat
tacccctggaaacgtagaaaagttgatggtggaggagaaggtggtggaggagggcaaact
cgagatttccttggggttggtgtacaaacgttgtgccatccatcgtctatcaatgggtgg
atttga
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