Raphanus sativus (radish): 108849861
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Entry
108849861 CDS
T06014
Name
(RefSeq) long chain acyl-CoA synthetase 7, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00061
Fatty acid biosynthesis
rsz00071
Fatty acid degradation
rsz01100
Metabolic pathways
rsz01212
Fatty acid metabolism
rsz04146
Peroxisome
Module
rsz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108849861
00071 Fatty acid degradation
108849861
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108849861
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsz01004
]
108849861
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108849861
Enzymes [BR:
rsz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108849861
Lipid biosynthesis proteins [BR:
rsz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108849861
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of breast milk
108849861
Exosomal proteins of breast cancer cells
108849861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108849861
NCBI-ProteinID:
XP_056865217
UniProt:
A0A9W3DN92
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Position
4:complement(11097792..11104660)
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AA seq
698 aa
AA seq
DB search
MEFSSPAQRRLQTLRSHLDSSTADDPASLFLNATASAAPFSNEDSYSVVLPEKLDTGIWN
VYRSAKSPTKLVSRFPDHPEIGTLHDNFVHAVETYPDNKYLGTRARPDGTIGEYTWMTYA
ETASARQAIGSGLLYNGINLGACVGLYFINRPEWLVVDHACAAYSFISVPLYDTLGPDAV
KFVVNHATLQAIFCVPQTLNTLLSFLSEIPSIRLVVVVGGADENLPSLPTGSGVKIVSYQ
KLLSQGRSSLHPFSPPKPEDIATICYTSGTTGTPKGAMLSHENLISNVAGSSLSINFLPD
DIYISYLPLAHIYERSNQIMGVYGGVSIGFYQGDIMKLMDDLAVLRPTVFCSVPRLYNRV
YDGITSAVTSSGVTKRRLFQLAYNSKKKAILNGRSPSPLWDKLVFNKIKEKLGGRVRFMG
SGASPLSPDVMDFLRVCFGCSVREGYGMTETSCVISSMDEGDNLSGHVGSPNPACEVKLV
DVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEEQTKEIMDEDEWLHTGDIGLWLPGGR
LKIIDRKKNIFKLAQGEYIAPEKIENVYTKCRFVSQCFIHGDSFNSSLVAIVAVDPDVMK
DWASSEGIKYENLGQLCKDPKVRKAVLTEMDIVGREAQLRGFEFAKAVTLVPEPFTLENG
LLTPTFKVKRPQAKAYFAEAISKMYAEIAACDPMPSKL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggagttttcttcaccggcacaacgccgtctccagacccttcgctctcaccttgattct
tccacggctgatgatccagcctctctcttcctcaacgccaccgcttctgcggcacccttc
tccaacgaggatagctacagcgttgtgctcccagaaaagctggacactggaatatggaat
gtctacagatctgcaaagtcacctaccaagctcgttagcagattcccggatcatcctgaa
atcgggactctgcacgacaactttgtacatgctgttgaaacatatcctgataacaagtat
cttggtacacgagctcgtcctgatggaaccattggagagtacacatggatgacatatgcg
gaaacagcttctgctagacaagccataggttctggacttctgtataatggaattaatctt
ggagcttgcgttggactctattttatcaacagaccagagtggttggttgttgatcatgcc
tgtgcagcatattccttcatctctgttcctttatacgatacacttggtccagacgctgtt
aagtttgttgtgaatcatgctactcttcaggctatattttgtgtaccacaaaccttaaat
accttgctaagcttcctatctgaaatcccatccattcgtctcgttgtggttgtgggaggg
gctgatgaaaatttgccatcacttcctacaggatctggagtaaaaattgtatcataccaa
aagctattgagtcagggtcgcagtagcttacatccattttcccctccaaaacctgaagac
attgcaaccatatgctacactagtggaaccacaggaacaccaaagggtgctatgttgagt
catgaaaacttgatatcaaatgtcgctggttccagcttgtcaataaatttcttacctgat
gacatttacatatcatatcttccattggcgcacatatatgaacgttcaaaccagataatg
ggggtgtatggtggtgtttccatcggtttctatcaaggggatatcatgaaacttatggat
gatttggctgtgttaaggccaacagtattctgcagtgtccctcgcttatataatcgagtc
tatgatgggattacaagtgcggtaacatcatccggggttacaaaaagaaggcttttccaa
cttgcctataactcaaagaagaaagcaatcttgaatggaaggagtccgtctccactttgg
gacaaactggtgttcaacaaaataaaagaaaagctaggtggacgtgttcgcttcatgggg
tctggtgcttctcccttgtcacctgatgtcatggatttcttgagggtatgctttggatgt
tcggtgcgtgaagggtatggtatgacggagacttcctgtgtcataagctctatggatgaa
ggtgacaatttatctggccatgtcggatctcctaatccagcgtgtgaggtaaaacttgtg
gacgttcctgaaatgaattacacatcggaagatcaaccatacccacgtggtgaaatctgt
gttagaggaccaatcatcttcaaaggctattacaaagatgaagaacaaacgaaagaaatt
atggatgaggatgaatggctacacacgggtgatatcgggttgtggttaccaggtggtcgg
ctcaagatcatcgacaggaagaaaaacatatttaagctggcacaaggagaatatatagca
cctgagaaaatcgaaaatgtttatacgaaatgtagatttgtttctcagtgtttcatacac
ggtgatagcttcaattcctctctagtggctatagttgcggttgatccagatgttatgaaa
gattgggcttcatcagaaggcatcaagtatgagaatctaggacagctttgtaaagatcct
aaagtgaggaaggctgttcttaccgagatggatatcgttggaagagaagctcagttgaga
ggatttgagtttgcaaaggctgtgactttggtaccagaaccattcaccttagagaatggg
cttctaacaccaacctttaaggtaaagagacctcaagcaaaagcttactttgcagaggca
atatccaaaatgtatgcggaaattgcagcttgtgaccccatgccttctaaactgtga
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