Raphanus sativus (radish): 108850111
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Entry
108850111 CDS
T06014
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108850111
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
108850111
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Pex16
Presenilin
Motif
Other DBs
NCBI-GeneID:
108850111
NCBI-ProteinID:
XP_018479196
UniProt:
A0A6J0N546
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Position
1:11320325..11325272
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AA seq
783 aa
AA seq
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MSSELKQLIVVAEGTAALGPYWQTIVSDYLIKIIRSFCGTELNGESNNVELSLVIFNSHG
SYCACLVQRSGWTKDVDVFLHWLSSIQFAGGGFNEAATAEGLAEALMIFSPPSVQAQPSN
DLKRHCILITASNPYSLPTPVYRPKLQNPNENGHAHSESRLSDAATVASYFSRCSVSLSV
VCPKQLPRIRALYNAGKLNPQSADLSIDTVKNAFYLVLISENFLEARAALSHAATNLPQT
TQSPVKVDRATVAPSLQVTGQPPAPVPSANGPMMNRQPVSVGPVPTATVKVEPSTVCSMA
TVPTFPHIPSVARPATQAMPSVQTSSVSPISQEMVTKAENAPDIKPVVGGMTPQLRTGPP
GGANVNLLNNLSQVRQVMSSAALAGASSSGQSAVAMHMSNMISTGMATSLPPSQTPFSSG
QQGITSMAGSGTLQGTAQAGQGPGPNNAFSPQTTSNVASNLGVSQPMQGINQGSQSGAQM
MQSGISMNQNMTSVSSGTGGMMPTPGVGQQAQSGIQQLGGSNSSAPNMQLSQPSSGAMQP
SQSKYIKVWEGNLSGQRQGQPVLITRLEGYRSASAADSLAANWPPTMQIVRLISQDHMNN
KQYVGKADFLVFRAMSQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDM
VVFKPQIPNQQQQQLQQQQIQQQQHQQQQQQQIQQQQHHQQQQQQLPQLQQQHQMSQLQH
HQQQQHQLSQLQHHHQQQQQQQPQQMVGSGVMGGQGFAQAPGRSQQGGGGGGQPNMPGAG
FMG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggagttgaaacagctgatcgtcgttgctgaaggcaccgctgccttgggtccc
tattggcaaaccatcgtctccgattatctcatcaaaatcatcaggtctttctgtggcact
gagttaaacggagagagtaacaatgttgagctatcacttgtcatcttcaactctcatggc
tcatattgtgcttgcttggtacaaaggagtggctggacaaaagatgttgatgttttcttg
cattggctttcgtccatacaatttgccggtggtggtttcaatgaggctgccacagccgaa
gggcttgccgaagcattgatgatattttctcctccttcagtccaagcacaaccaagtaat
gatctgaaaaggcactgtatcctaatcaccgccagcaacccttactcgttgccaacgcct
gtatatcgtccaaaattgcaaaatccgaatgaaaatggccatgcgcactctgaaagtcgt
ttatcagatgccgcgacagtcgcttcatatttttctaggtgctctgtttctttgtctgtt
gtgtgtccaaagcagcttccaaggataagagctctgtataatgcgggaaagctcaatcca
caaagtgcggacttgtcaattgacacggttaagaacgcattctatcttgtcctgatctca
gagaactttttggaggcacgtgctgccttaagtcatgctgctacaaatttgccacagacc
acccagagccctgtgaaagtggacagggccactgttgctccatctcttcaagtcactggc
caacctccagctcctgtgccatcagccaatggacctatgatgaatcggcaaccagtctct
gtcggaccagttcctactgctactgtgaaagttgagcctagcactgtgtgttctatggca
acagttccaacttttcctcatatcccgtccgtagctcggcctgctacacaagcaatgccg
tcagttcaaacatcgtcggtatcaccaatctctcaggaaatggtcaccaaagcggagaat
gcacctgatattaagcctgtagttggtggaatgacgccacaattgcgtactggccctcct
gggggagctaatgtaaatctgctgaataatctttctcaagttcgacaagtcatgagctct
gcagctctggcgggtgcatcctcgtctggccaaagtgcggttgcaatgcatatgtcaaat
atgatatcaacaggaatggctacatctctgcctccatcacaaactccattttcatctggg
cagcagggaattacttcaatggctggttcgggtacattacagggaactgcacaagcagga
caaggcccgggtcctaataatgccttcagtcctcaaacaacgtcaaatgtcgcgtcaaac
cttggcgtctctcaaccaatgcaagggataaaccaaggaagtcagtctggagcacagatg
atgcaaagtggaatttccatgaaccagaacatgacgagtgtctcctctggaacaggtgga
atgatgcctactccaggagttggccaacaagcgcagtcaggaatacaacaacttggtggt
agtaacagttcagctcctaatatgcagttgtcacagccatcgtcaggggctatgcagcct
tctcaatccaaatatattaaagtctgggagggaaatttatcagggcagagacaagggcag
cctgttcttatcaccagacttgagggttaccgaagtgcgtctgccgctgattcgttggca
gccaattggccacctactatgcagatcgttcggctcatatcccaggatcatatgaataac
aagcaatatgtcggcaaagctgacttcctcgtgtttcgggctatgagtcaacatgggttt
ctaggacaacttcaggagaagaaactttgtgcagtcatccagctgccatcacagactctg
cttctctccgtctctgacaaggcttgccgcttaattggaatgctttttccaggggatatg
gttgtgtttaagccacaaattccaaatcagcaacagcagcaactccaacaacaacagatc
cagcagcaacaacatcaacagcagcagcagcaacagatccagcagcagcaacaccaccaa
cagcaacagcaacagctgccacaactccagcagcagcatcaaatgtcacagctccaacat
catcagcagcaacaacaccagttgtcacagcttcaacatcatcaccagcagcagcagcag
cagcagcctcaacagatggttgggtcaggagtaatgggtggtcaagggtttgcgcaagct
cctggaagatcacaacaaggtggtggtggcggagggcagcctaacatgccaggagccggc
ttcatgggttaa
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