Raphanus sativus (radish): 108850251
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Entry
108850251 CDS
T06014
Name
(RefSeq) putative pectinesterase/pectinesterase inhibitor 28
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00040
Pentose and glucuronate interconversions
rsz01100
Metabolic pathways
Module
rsz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108850251
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
108850251
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Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Talin_R4
Motif
Other DBs
NCBI-GeneID:
108850251
NCBI-ProteinID:
XP_018479320
UniProt:
A0A6J0N3U1
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Position
4:11029595..11032204
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AA seq
688 aa
AA seq
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MAFGSHDDESKRKRRYAMISISSVLLVSMVVAVTIGVNVNNHDNGSKEEITASVKAIKEV
CAPTDYKRTCEDTLRKDAKDTSDPLELVRAAFNVTIKQITNVARKSQTMIELQKDPRTKM
ALDQCKELMDYAIGELSNSFEELGKFEFHKVDEVLIKVKVWLSATITHEQTCIDGFKGTK
GDAGETMKKALKTAVQLTHNGLAMVTEMSNYLGQMQFTEMNSRRLLSQEPSWVDGRVRRL
LTAPLSEVKPDMVVAQDGSGQYKTINEAMENVPKNKNVTFVIYIKTGVYKEFVQVDRTKP
DLVFIGDGPDKTVITGEKSFQDGITTYRTATVAIIGDRFIAKNMGFENTAGAAKHQAVGI
RVLSDQSIFYNCRFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCILLVRKP
LPNQACPITAHGREDPKETTGFVLQGCTIVGEADYLAVKETSKAYLGRPWKAYSKTIIMD
TFIPDFIAAEGWQEWRGNFGIDTLFYSEARNTGPGAGVTGRVTWPGIKKLSDEEILGYTP
AKYIQGDEWIPGKGVPYTPGLFAGNGSATVAASSNSTTTGPSVPGSTNSTGNVTGSSSNT
TGPAPAAAPGISSITNSSGLGSPSASPLASPSATPSASPASPAATPSALPSASPSATPSA
SPSATPSATPPSASPSISPSASPKTAST
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcatttggatcacatgacgatgaatcgaagaggaaaaggaggtatgcaatgatctcc
atatcttctgttcttctcgtttcaatggttgtagccgttaccatcggcgttaacgtcaac
aatcacgataacggaagtaaagaagagatcacggcttccgttaaagccatcaaggaagtc
tgcgcgccaacggattacaagaggacttgtgaagacactctaaggaaagatgcaaaagac
acatcagacccgttggagcttgtgagagcagcgtttaacgtgaccatcaagcaaataacc
aacgtggcgaggaagtcacagactatgatcgagctacaaaaagatccgaggacgaagatg
gctttggatcaatgcaaggagctgatggattacgcaataggcgagcttagtaactcgttt
gaggagttgggaaagttcgagtttcacaaggtggacgaagtgttgattaaggtaaaggtt
tggctcagcgcgacgataacccatgagcagacgtgtatcgacgggtttaaagggacaaaa
ggcgatgcaggtgagacgatgaagaaggctttgaaaaccgcggttcagttaacgcataac
gggcttgcaatggtcacggagatgtcgaattacttgggacaaatgcagttcacggagatg
aatagtcgccggttgctgtctcaagagccttcgtgggtggatgggcgtgtccgtaggctc
ttgaccgctccattgtctgaggttaaaccagatatggtggtggctcaggacgggagtggt
cagtacaagaccatcaacgaggcaatggaaaatgtccccaagaacaagaatgtgactttc
gtgatttacattaagaccggagtctataaagagtttgttcaagtggacaggaccaagcca
gatcttgtcttcattggtgatggaccagacaagactgtcattaccggcgagaaaagtttc
caggacggtattaccacctaccgcacagccaccgttgcgatcattggagaccgtttcatt
gccaagaacatgggtttcgagaacactgccggggcagcaaagcatcaagcggttggaatt
agggttctttcagaccagtccatattctacaattgcagatttgatggttaccaagacaca
ctctacgcacattcccaccgtcagttctaccgggactgtactatctcgggcacaatagat
tttctctttggagacgcagccgctgtattccagaactgtatattattagtgaggaaacca
ctaccgaaccaggcatgtcccatcaccgcccacgggcgtgaagatccgaaggaaacaaca
ggattcgtgctccaagggtgtactattgttggagaagcagattacttggcagtcaaggaa
actagcaaagcttatcttggaaggccatggaaagcgtattcaaaaactatcatcatggac
acgtttatacctgattttattgcggccgaaggatggcaggagtggcgaggaaactttggt
attgacacgttattttattcggaggcaaggaatactgggccgggtgcaggtgtcacgggc
cgggttacttggccaggaatcaagaagttgagtgatgaagagattcttggatacacaccg
gctaagtacatccaaggtgatgagtggattccgggtaaaggtgtaccgtacacccccggt
cttttcgccggaaacggttcagcaaccgttgcagcttcctccaattccacaactaccggt
ccaagcgtaccagggtcgacaaattctaccggtaatgtaactggttccagttccaacacg
acagggccagctccagcggctgccccaggaatctcatccatcactaattccagtggctta
gggtcaccttcagcttcaccattagcttctccctcggctactccttcagcttcaccagct
tctcccgcagctactccttcagctttaccgtcagcttctccatcggctactccttcagct
tctccatcggctactccttctgctactccaccttctgcttcaccttcgatttcaccttcg
gcttctccgaagactgcatctacctag
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