Raphanus sativus (radish): 108850253
Help
Entry
108850253 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108850253
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108850253
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108850253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-Nse
Prok-RING_1
FANCL_C
RINGv
zf-RING_6
zinc_ribbon_16
Prok-RING_4
SLX1_C
DUF3149
Baculo_RING
Baculo_IE-1
PHD_NSD
zf-RING-like
Tmpp129
Rtf2
Motif
Other DBs
NCBI-GeneID:
108850253
NCBI-ProteinID:
XP_056865222
UniProt:
A0A9W3DMP2
LinkDB
All DBs
Position
4:complement(11132761..11134109)
Genome browser
AA seq
295 aa
AA seq
DB search
MKSFLPLTSKQTAFPAPVLFLLLAMSELASCQSGQEDPDKPHDYIRSLIVHMVITIAILI
PFVFLALYIRHCRETDGSVNHFLGATNATVARGLEPSMIQTFPTFIYSEVKTQRIGNGAL
ECAICLNEFQDDETLRLLPKCDHVFHPHCIGEWLQSHVTCPVCRTNLADQQQTAEPVEPE
VIAETDIESQQTVIPELAVESVARVRLPRSHTTGHSMTLPGECTERFTLRLPGDLIKKIM
ESGKTNRSKSLSALPRSTGKPVSVDRSIDRWDRWLFLRSPPFMWRRWERGIGGSI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttcttaccgttgaccagtaagcaaaccgctttcccagctcctgtcctgttt
ctactattagccatgtcggagctagcgtcatgtcaatccggacaagaggacccagataag
ccgcacgattacattcgaagtctcatcgtgcatatggtaattacgattgcaatcctcatt
cccttcgtgttcctcgccctctacatccgccactgcagggagacagacggcagcgttaac
cattttctaggagcgactaacgcgacggttgcgcgtggtctcgaaccgtcgatgatccag
acgttcccgactttcatctactcggaagtgaagacacagaggatcgggaacggtgcgttg
gagtgtgccatctgtctcaacgagtttcaggacgatgaaaccctgcgtttgctaccaaaa
tgcgatcacgtgttccaccctcactgcatcggcgaatggctccaaagtcacgtgacttgt
cccgtttgccgcacgaatctcgctgaccagcagcagacggctgaacctgtcgaaccggaa
gtaatagccgaaaccgatatcgagtcgcagcaaaccgtgattcctgaactggcggtggag
agtgttgcacgtgtcagattaccgaggtcgcacacgacgggacattcgatgacattacct
ggagaatgtaccgagcggtttacgctaaggttaccgggtgatttaataaagaagataatg
gagagtgggaaaacgaaccggtcgaaaagtctttcggctctaccgaggagtactggtaaa
ccggtttcggttgaccgatcaatagatcgatgggaccggtggttattcctcagatcaccg
ccgtttatgtggcggagatgggagcgaggaattggtggtagcatttaa
DBGET
integrated database retrieval system
