KEGG   Raphanus sativus (radish): 108850533
Entry
108850533         CDS       T06014                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108850533
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    108850533
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN DEAD ResIII zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 zf-C3HC4_2 zf-C3HC4_4 Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 Baculo_IE-1 zf-RING_4 AAA_34 zf-ANAPC11
Other DBs
NCBI-GeneID: 108850533
NCBI-ProteinID: XP_018479552
UniProt: A0A6J0N4G8
LinkDB
Position
4:complement(19424246..19429435)
AA seq 1140 aa
MDDMEMRRTEHEEAVSSSDDCKIVAETPDESYVVFRTSTGVRISSQLDNGGGSNSEAMPV
KDEVTGDGSVTLFDGVSNGGVESESFRAAGLEFNVKEEPDLDFENRGEEMVIDDNLEKPV
VVALAQEEEEMIVDSIALSRGSLSDCVTVEVKQEPENLETEQSIIPTALILAPTPLQVIR
PKAESLDTPEVIDVESDSLKHEDVSSAHVKMEQVEGTKVGALSLSLQVRDQKPVYVKKVN
NTQGKVKVEDGDFPVEKDWYLVGRSLVTATSTSKGRRLEDNEVVNFAFPSTVNWKVPNIV
RFSTKRCGEIGRLPMEWSNWAVSLLRSGKVKMLGRCVAAPPFLQMMQDIMLYVSFYIHSS
IFTDVSKSTWRIGSSPNIESTLHPLLQLFRHLTIKPYQKAEFTPQELDSRKRSLNLENDS
DERAALLAIAKRRKGAPLYLEQDKDEEDAPDSYMNRVVGAADSYNLEEMEAPSTLTCNLR
PYQKQALYWMSESEKGIDVDKAAETLHPCWEAYRICDERAPSIYVNIFSGEATIQFPTAT
QMARGGILADAMGLGKTVMTIALILARPGRGNPENEDDLATDVNGNKPKGKESHKALTCV
KAKGGTLIICPMALLSQWKDELETHSKPDTVSVLSYYGGDRTQDAKAIASHDVVLTTYGV
LTSAYKQDKTNSIFHRIDWFRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNK
LEDLYSLLCFLHVEPWCNWAWWNKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDKE
GSLILELPPTDVKVIECEQSEAERDFYTALFKRSKVQFDQFVAQGRVLHNYANILELLLR
LRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVSQRAPSRAYVEEVIQDIRDGNS
KECPICLESADDPILTPCAHRMCRECLLTSWRSTSCGLCPICRTVLKKSELISCPTESIF
RVDVVKNWKESSKVSELIKCLEKIRMSGTGEKSIVFSQWTSFLDLLEIPLRKRGIEFLRF
DGKLAQKAREKVLKEFNETKQKTVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAI
MRIHRIGQKRTVCVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR
NT seq 3423 nt   +upstreamnt  +downstreamnt
atggacgacatggagatgcggagaaccgaacacgaagaagctgtttcaagttcagacgac
tgtaagatcgttgcagagactcccgatgaatcctatgtggtgttcaggacatccactgga
gtccgaatctcttctcaactggacaatggcggcggatccaattcggaagctatgccagtg
aaagacgaggtaaccggtgacggttctgttactctttttgacggtgtgagtaacggtggt
gtagaatctgaatcgtttagggcggcgggtttagagttcaatgttaaggaggaacctgat
ttggattttgagaatcgaggagaagaaatggtgattgatgataatctagaaaagcctgtg
gtggttgctcttgctcaagaagaagaagaaatgattgttgattctatagcactttcaaga
ggctctctcagcgattgtgttactgttgaagtcaaacaagaacctgagaatttggagaca
gagcaatctattataccaactgctctcatcttggcgccgacgccacttcaagttatccga
ccgaaggctgagagtttggatacccctgaagttattgatgtagaatctgattctctaaag
catgaagatgtatcatcagctcatgtgaagatggagcaggttgagggaacaaaggtgggt
gctttgagtttgagtctgcaagtgagagaccagaaacctgtgtatgtgaagaaggtaaat
aatacacaagggaaggtgaaagtggaagatggtgatttcccggtggagaaagactggtac
ttggttggtaggtctcttgtcactgctacttccactagtaaaggaaggagactggaagat
aacgaagttgtcaatttcgcatttccctctactgtcaattggaaagttccaaacattgtt
cgtttctctaccaaaagatgtggagagattggtaggcttccaatggaatggtcaaactgg
gctgtcagccttttgagatctggtaaagtcaaaatgctaggcagatgtgttgcagcgcca
ccctttctacaaatgatgcaagatattatgctttatgtcagtttctacattcacagctcc
atattcactgatgttagcaaatccacttggaggattggttcttccccgaacatagagtcc
acgcttcatcctctgctgcagcttttcagacacttgactatcaaaccttaccaaaaggct
gagtttactcctcaggaacttgactctcgcaaacgctccctgaacttggagaatgactct
gacgaaagagcagcattgttggccatagcgaaaagaagaaaaggtgctccgctgtatctg
gaacaggacaaagatgaagaagatgctcctgattcatatatgaatcgggtcgttggcgct
gcagattcatataacctggaggaaatggaagctccaagtacactcacgtgtaacctgaga
ccataccagaaacaagcactctactggatgtcagaatctgaaaaaggaattgatgttgat
aaagcagctgaaactctccatccttgctgggaggcttatcgaatctgtgacgagagggca
ccttcaatttatgtgaacatcttcagcggtgaagcaacaatccagtttccaacagctaca
caaatggcaagaggcggaatattggcagatgccatgggacttggaaaaactgtgatgaca
attgcactaatacttgcacggccaggcagaggtaatccagaaaatgaagatgacttggcg
acagatgttaatggaaataaacctaaggggaaggagagtcataaagcactaacatgtgtg
aaagcaaaaggaggcactcttattatttgtcccatggcattgttaagccaatggaaggat
gagcttgagactcactcgaagcctgacacagtgtctgtgttgtcttactatggaggggat
aggacacaggacgcgaaagctatagcgagtcatgatgtggtcttgacaacttatggtgtc
ttaacctcggcttacaagcaggataagacgaacagtattttccacagaattgattggttc
aggattgttcttgatgaagctcacacgatcaaatcatggaaaacacaagctgctaaagct
acatttgagttgtcttcccactgcagatggtgtctgacagggactcctttacaaaacaag
cttgaagatctttacagtcttctttgcttccttcatgtcgaaccatggtgcaactgggct
tggtggaataagttgattcagaagccttatgaaaatggtgatccacgaggactaaagctg
atcaaggcgattttgaggccattgatgctgagaagaacaaaggagacgagggacaaagaa
ggaagtctaattcttgaacttcctccgaccgatgtcaaagtgattgaatgtgaacaatct
gaagcagaacgtgacttctatacagcccttttcaagagatctaaagtccagtttgaccag
tttgtggcacaaggaagagttcttcacaactatgcaaacatcctcgagctcctcctccgt
ctacgccaatgttgcaaccacccttttctagttatgagccgggcagattcacaacaatac
gctgacttagacagcctggcaaggagatttcttgacaacaatcctgactcagtttctcaa
agagctccctctcgggcatacgtcgaagaagttatccaagacatacgtgatggcaacagc
aaagagtgcccaatatgtttggagtctgcagatgatcccattctcacaccttgtgctcac
agaatgtgccgtgaatgcctccttactagctggcgctctacttcttgtggtctatgccca
atctgcaggacagtactgaagaaaagtgagctcatctcatgcccaactgagagtatattc
cgtgttgatgttgtaaagaactggaaggagtcctcaaaggtctcggagcttataaaatgc
ttagagaagattcggatgtctggtacgggggaaaagagcattgtgtttagccagtggact
tcgtttttggatctcctggagattcctttgagaaaaagaggaattgagtttcttagattc
gatggaaagcttgcacagaaggcgagagaaaaggtcttaaaagagttcaatgaaaccaaa
cagaaaacagttctactgatgtctctgaaagctggaggagttggtctgaatctgaccgca
gcttcaaacgtcttcttaatggatccatggtggaatccggcggtggaagagcaagcaatc
atgagaattcatcgcatagggcagaaaagaactgtatgcgtcagaagattcattgtcaag
gatacagtagaggaacggatgcagcaagttcaggcgaggaagcagcggatgattgctgga
gctttgactgacgaagaagtccggtcggccagacttgaggagcttaaaatgttgttccga
tga

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