Raphanus sativus (radish): 108850634
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Entry
108850634 CDS
T06014
Name
(RefSeq) proline--tRNA ligase, cytoplasmic-like
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108850634
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108850634
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108850634
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
108850634
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108850634
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108850634
Prokaryotic type
108850634
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_2b
ProRS-C_1
HGTP_anticodon
Motif
Other DBs
NCBI-GeneID:
108850634
NCBI-ProteinID:
XP_018479633
UniProt:
A0A6J0N6S6
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Position
4:30034606..30036341
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AA seq
533 aa
AA seq
DB search
MSKSEEEDIATSTSSQSLQVPGKETEASVFAKRKEKEMKKETRLGISAKKEEDFASWYSQ
ACRFGELITLSDTKGLYILEPTATKIWNILRSYMDAELEKLGNVEEKKFPMLIKRDSLEK
EKDHIEGFKPEVAWVTRAGEHDLPTPYALRPTSETIIYPYFRNRIRTHRDLPMKVNQWVN
VVRWEVSDPIPLIRGREFDWQEGHSAFATKEEADEEVLEVLNVYSRVYEDLLAVPVIKGR
KSEKEKFAGADYTTSVEAFVPATGRGVQAATSHCLGQNFAKMFEITFEDKEVRKDKKKSM
VWQNSWGLSTRSIGVMVMTHGDDKGLVLPPKVARYQVVVIPVPFKGADTKRISRECQAVR
ASLQGAGVRAVVDERENYACGWKYADWEMKGVPLRIELGPRDLEKNQVRVARRDTGAKMD
VLRVDLVERVKDLLEEIQRDLYAVAKRRLEESIQKVETWDEFKEALRGKKLVLAPWCDEV
EVENGVKENTKGENEAGAKTLCTPFEQPELREDTLCFASGKPAKKWTYWGRSY
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtcagaagaagaagatatcgctactagtactagttcgcaatccctacaagtt
cctggaaaagaaacagaagcctctgtttttgctaaaagaaaagagaaagagatgaagaaa
gagactcgtctcggaatctctgcaaagaaagaagaagacttcgcgagttggtactctcag
gcttgcagattcggtgagctcataaccctctccgacacaaaaggactctacatcctagag
ccaacagcaacaaagatctggaacatcctaagaagttacatggacgcagagctcgaaaag
ttaggtaacgtggaggaaaagaaattccccatgttaataaaacgtgattccctcgagaag
gagaaggaccacatcgaagggttcaagcctgaggttgcttgggtcacaagagcaggtgaa
catgatctcccaacaccgtacgctctacgtccaaccagcgagaccatcatctacccttac
ttcagaaacaggattaggacacaccgtgatctcccgatgaaggttaaccagtgggttaac
gttgttagatgggaggttagcgaccctatcccgttgatcagaggtcgcgagttcgattgg
caggaaggtcacagtgccttcgccaccaaggaagaggctgatgaagaggttcttgaagtt
ttgaacgtctactctcgtgtctacgaagatcttcttgcggttcctgtgataaaaggtcga
aagagcgagaaggagaagtttgctggtgcggattacaccacaagcgtcgaggctttcgtg
ccagctactggtcgtggtgtacaagcagcgacctcgcattgtttaggacagaactttgcg
aagatgtttgaaatcacatttgaagacaaggaagtgaggaaagacaagaagaagtcaatg
gtgtggcagaactcgtggggtttaagtacaagatcgataggagtgatggttatgacacat
ggagatgacaaaggcttggtgttgcctccaaaagtggcacgttatcaagtcgttgtgatc
cctgttcctttcaaaggtgctgataccaaaaggatctctcgagagtgtcaagctgttaga
gcctcattgcaaggtgctggggtacgtgctgtagttgatgagcgagagaactacgcttgt
gggtggaagtatgcagactgggagatgaaaggagtgcctttgagaatcgaactcggtcca
agagatttggagaagaatcaggtgagagtggcgaggcgtgacactggagcgaagatggat
gtgttgagagtggacttggttgagagagtcaaggacttgttggaagagatacagagagat
ctctatgctgtggcgaagaggaggcttgaagaaagcattcagaaggttgaaacttgggat
gagtttaaggaagctctgagagggaagaagctggttttagctccatggtgtgatgaagtt
gaggtggagaatggtgtaaaggagaatactaaaggtgaaaacgaagcaggagctaagact
ctatgcactccctttgaacagcctgaactaagggaagacactttgtgctttgcatcagga
aagccagccaagaagtggacctattggggaagaagttactaa
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