Raphanus sativus (radish): 108850808
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Entry
108850808 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108850808
KO
K17925
sorting nexin-13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rsz04990
]
108850808
Domain-containing proteins not elsewhere classified [BR:
rsz04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108850808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
108850808
NCBI-ProteinID:
XP_018479785
UniProt:
A0A6J0N564
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All DBs
Position
1:6901856..6906998
Genome browser
AA seq
1011 aa
AA seq
DB search
MSSQKQVVTVRDLVEEAKKRIVILVVCVVGLSYLLSLTSSSVLVNLPAAACLIILLRYFS
LDIEIKRKTAAYNNSKASTPSLINKPPELPKAAPRSDWRSKVNSQVVEDALDRFTRHLVS
EWVLDLWYSRITPDKQGPEELVFIINGVLGEISRRFRNVNLIDLLTRDLIDIICRRVEVF
REHQGKIERKQRRSLSFEDRDSELRRLMAADDKLHPALFSPESEHKVLQHVVDRLISITF
RPEDLHCAFFHYTVRELLACCVMRPVVNLANPRFINERIEAAVISKIKTSDGSSAAKETS
QSEDLSEISHDPFSRYLDPSVTGVELVQLKNEQQEKKNATDKQHVKDLAKDPLLSIDTRS
SRSWNSLPLPSKGVDDIKDLQGHRGGEGWGDVLDKVSQRKTETLSPEHLESVWAKGRNYK
KKEGEKVVERVPPRWSSKESCSDADAAEPKKLSESTANARGTSQHKEVNTESLLSGYSSA
EEDEDQTKSSRSYTSEEDETVTGLNSPGTRVWDGRTNRNPVVSRIHHPLENSGRRSVKHS
KEHEHYEQAPRHQSSRKRSRRSGQIRGNDDSDDSENDSLARSCSGTSATSSASYISMAGS
DLPNALKSSLLVDSFDKLRCEVLGANIVKSSSKMFAVYSIAVTDESNRSWSIKRRFRHFE
EIHRRLKVFPEYNLHLPPKHFLSTGVDIPVIQERCLLLDDYLKKLLQIPRISGSIEVRDF
LSVDSQAYAFSSSFSIVETLTVKPVRKTSNMAEVTPGLLPPRENLNSENGKSGVKSDLKS
KAKSPGNEYTKTPDSDVGNSKENGGLKVGTQHGDVVAFAGLPTEWVPPKLTLPLLDLVDV
VFQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKIRLLRRGTVVASGVQRVEQILWP
DGIFITKHPKRQQQSSSSEEEQQQEAERRAKFVRELMIEKAPATVVSLVGQKEYEQCAED
LYFFLQSSVCLKLLAYDLLELLLTSAFPEMEQAFKQLQDEKHLFGQYTPPT
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccagaagcaggtggtgacagttagggacctggtagaggaagccaagaagcgg
atcgtaatccttgtggtatgcgtcgtcggactctcctacctcctctccctgacaagttca
tctgttttagttaacctccctgctgctgcttgcttgatcatcctccttcgttacttctca
ctcgacatcgaaatcaaaagaaagaccgcagcgtacaataatagcaaagcttcgacacca
tctctaataaacaaacctccagaactccctaaagcagctccacgctctgattggagaagc
aaagtgaactctcaggtcgttgaagatgctttagatcgcttcactcgtcacctcgtttcc
gaatgggtgcttgatctctggtactcccgcataacaccggataagcaaggtcctgaggag
ctggtgtttattatcaacggtgttctcggggagatttcacggcggtttagaaacgtgaat
ctcattgatctgttgacaagggatctgattgatattatatgtcgtcgtgtggaggttttc
cgtgaacatcaaggaaagattgagagaaaacaaaggagaagcctcagtttcgaagaccgt
gactcagaactgaggcgtctgatggccgctgatgataaattgcaccctgcattgttctct
cctgaatccgagcataaggttctccagcatgtagtggaccgtctcatttcaataacgttc
aggccagaggatctgcactgtgcttttttccactataccgtgagagaacttcttgcttgc
tgtgtgatgcgaccagtcgtaaatttagccaatcctcggtttataaatgagaggattgaa
gctgctgtgatatcaaagataaagactagtgacggttctagtgctgcaaaagagacatct
cagtctgaggatctctcggagatttctcatgatcctttttctagatatctggacccctct
gtcacaggtgttgagcttgtgcaattaaaaaatgaacagcaggaaaagaaaaatgctaca
gataaacagcatgtaaaggatttggccaaagatccattgctttcaatagacactcgatct
tcccgatcttggaactccttacccttaccttccaaaggggttgatgatattaaagatctt
caaggacatcgaggaggagagggctggggtgatgtattagacaaggtgtcacaaaggaaa
acggagaccctttctcccgagcatcttgaaagcgtgtgggcaaagggaagaaactataaa
aagaaggaaggtgagaaagttgttgagcgggtgccgccgagatggtctagcaaggaatcg
tgcagcgatgctgatgctgcagaacctaaaaagttgagtgaaagcactgcgaatgcaaga
ggaactagccagcataaggaagtaaatacagaaagtctcttatcaggttattcctctgct
gaagaggacgaggatcaaacaaaaagtagtcgttcttatacatctgaggaggatgaaact
gtaacaggtctaaacagtcctgggactcgagtctgggatggtcgaacgaacagaaatcct
gttgtttcacggatacaccatccacttgaaaattctggtcgtcgttccgttaaacacagt
aaagagcatgaacattacgagcaagcacccagacatcaatctagcaggaagagatccaga
cgttctggacagattcgaggcaatgatgatagcgatgattctgaaaatgattctttggct
agatcatgcagtggaacatctgcaacctcgtctgcatcatacatttcaatggcgggaagt
gaccttcccaatgcccttaaaagttctttgttggttgattcctttgacaaattgagatgt
gaggttttgggtgccaatattgtgaagagtagttctaagatgtttgctgtgtattcaatc
gctgtcacagatgaaagtaatcgtagctggtctatcaaaagaagatttcgacattttgag
gagattcaccggcggcttaaagtgtttcccgagtacaatcttcatttaccgccaaagcat
ttcctgtcaacaggggtggacatacctgttatccaagagcgatgtctactccttgatgac
tatctcaagaagcttttgcagatacccagaatttcaggatcgattgaagttcgggacttc
ctcagtgtggattcccaggcttatgcgttttcaagctctttctctatcgttgagacgctg
acggttaaacctgtccgtaagacctcaaatatggccgaggtgacgccgggccttcttcct
ccgagagaaaatcttaattcagagaatgggaaatcgggagtcaaaagtgatctgaagtca
aaagcgaaatcgcctggaaatgaatatacgaagacgcctgattcagatgtgggaaatagc
aaagagaacggtggactgaaagtgggtactcaacatggtgatgttgtggcctttgcaggc
ctgccgacagagtgggttcctccgaagctaacactgcccctactagacttggtagatgtc
gtttttcagctccaggagggtgggtggatcaggcggaaagctttttgggttgccaaacag
atactccaactagggatgggcgatgcgttagacgattgggtacttgagaaaatccgtctt
ttgcggcgaggaactgtagttgcttctggagttcaacgggttgaacagatactatggcct
gatgggatattcatcacaaagcatccaaaaaggcagcaacaatccagcagttctgaagag
gagcagcaacaagaagcagagagacgagccaagtttgttcgtgaactgatgatcgaaaaa
gctccagcgactgtagtgagtcttgtgggtcaaaaggagtatgaacaatgtgcggaagac
ctctacttcttccttcagtcatcagtatgtctaaagctgctggcatatgaccttctggag
ctgttgctgacctcggcgtttccagaaatggagcaggctttcaaacagttgcaagacgaa
aaacacctctttggtcaatacacaccaccaacctga
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