Raphanus sativus (radish): 108850826
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Entry
108850826 CDS
T06014
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108850826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108850826
Spliceosome [BR:
rsz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108850826
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
108850826
NCBI-ProteinID:
XP_056864941
UniProt:
A0A9W3DM41
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Position
1:6909559..6911253
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AA seq
487 aa
AA seq
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MAQLEDSFLAEIDELSDYEEDNVANHEGDISMDTSDLETLKSDEDEDLDTVSKLQKTQRY
LDIIHKVDEALLGNKGFDKAMTTSEDDPEYKLVVDCNHLSVDIENEIVTVHGFIRSKYKL
RFPELESFVHHPVEYASVVKQIGDEKDLALVPFKDLFKSTIISVSLMASTTQGKPLPEDA
LRKTLKACDRVIELDSALKKILGFVETKMGCIAPNLSAVVGSAVAAKLMATAGGLSGLAK
TPSCNVQVLGQKRKNLDGFSSATTQSRVGYLEQTDIFQNTPPGLKPKAIKLLAGKSTLAA
RIDASRGDPSGTNGRSLREEIQKKLDKLQEPGVARQPKPLPVPDMSSKKKRGGRRLRKMK
ERYAVTEMRKHANRVAFGVTPEESSLGDGLGEGYGMLGQGGSKRLRVSAVPSKLKLGARL
EKRLKERQYTSGVTTTSTASSGFMTSRLAFTPVQGIELCNPGAVQLGSGTQSTYFSESGT
FSRVKKI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacttgaagattcattcctcgcagagatcgacgagttatccgactatgaagaa
gacaacgttgcaaaccacgaaggagatatctccatggacacgtcagacttggaaacccta
aagtccgacgaagatgaggatctcgacaccgtctccaagctacagaaaactcagagatac
cttgatataatccacaaggtggacgaggctctcctcggcaacaagggtttcgataaagct
atgacgacgtcagaagacgatcccgaatacaagctcgtcgtggactgcaaccacctctcc
gtagatatcgagaacgagatcgtaaccgtccacggcttcatccgttccaagtacaagctc
aggttcccagagctggagtcgttcgtgcatcacccggtcgagtacgctagcgtcgtgaaa
cagatcggggacgagaaggacttagccctagttcctttcaaagacctctttaagagtacc
atcatctctgtttcgctcatggcttcgaccactcaagggaagcctctccccgaagacgcc
ttgcggaagacgctgaaggcgtgcgatagggttattgaactcgactccgcgctgaagaag
attctagggttcgttgagaccaagatgggatgcatcgcgccgaatctttcggccgttgta
gggagtgccgtggctgccaagctaatggctactgctgggggtttgtcagggctcgctaag
acgccttcctgcaacgttcaggttcttggacagaagaggaagaatcttgatggattctct
agtgcgacaactcagtcgcgcgtggggtatcttgagcagactgatatcttccagaacact
cctcctggacttaagccgaaagccatcaagctcttggcgggaaagtcgactttggcggca
aggatcgacgccagcagaggagatccatcggggactaacggtagatctttaagggaagag
attcagaagaagcttgacaagttgcaagaacctggcgttgcgaggcagcctaagccgctt
cccgttccggatatgagtagtaagaaaaagagaggcggtcggaggctgaggaagatgaag
gagaggtacgcggtgacggagatgaggaagcatgctaatagggttgcgtttggtgtgacg
cctgaagagagctcgcttggtgatgggttgggtgaagggtatgggatgcttggtcagggt
gggagcaagaggctgcgagtttccgccgtcccgagcaagctgaaacttggtgcgaggctt
gagaagaggctcaaagaaagacagtatacaagcggtgttactactactagtacagccagt
tctggtttcatgacgtcgaggcttgctttcactcctgtgcaggggatagagctgtgcaac
cctggagctgtgcagttagggagcgggactcagagcacttacttctcggagtcgggaacc
ttctctagggtcaagaagatatga
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