KEGG   Raphanus sativus (radish): 108851466
Entry
108851466         CDS       T06014                                 
Name
(RefSeq) notchless protein homolog
  KO
K14855  ribosome assembly protein 4
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rsz03009]
    108851466
Ribosome biogenesis [BR:rsz03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    108851466
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 DSE1_N Beta-prop_Aladin WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 ASA1 Beta-prop_WDR19_1st CFAP251_N Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR41 eIF2A NLE Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_SPT8 Tricorn_2nd PD40 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_NOL10_N Beta-prop_VPS8 Nbas_N PAC11 Beta-prop_DCAF4 Tricorn_N RMC1_N Beta-prop_WDR75_2nd WD40_RFWD3
Other DBs
NCBI-GeneID: 108851466
NCBI-ProteinID: XP_056864490
UniProt: A0A6J0N883
LinkDB
Position
4:7482006..7484501
AA seq 474 aa
METGTTVLCRLVDAEGTPLGDPMYIPRQAGPVQLTELANRFLNNEEKLNYAFYVSGEALS
VPVGTYIENRSVSVEEILTIQYREEAVFRTRPVSRISASIADHRDSVLCVSFSPDGTQLA
SGSGDTTVRLWDIYTQTPMFTCRGHTNWVMSVAWSPDGKHLVSGDLAGNICFWIPKTGML
DGRPVRGHRKWITSISWEPVHLTYPCRRFVTSSKDEDARIWDMTLKKSVTCLSGHTRGVT
CVKWGGDGIIYTGSQDCTIKMWHVTPEGVACLKGKLKEHGHWVNSLALSTDYVLRTGAFD
HTGKLYSSSSPEEVRKAALKRYDQAKGEYGERLVSGSDDFTMILWDPSVSDQFKKKLSGH
QKLVNHVCFSPNGQWIASASFDNSVKIWDGITGDFITTFRGHIGPVYQISWSPDSRMLLS
CSKDTTLKIWDIKLRRLEKDLPGHTDEVYAVDWSPDGEKVVSGGKDTSLKLWVG
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggagacggggacgactgtgttgtgtcggttagtagacgccgaaggaactcctttaggt
gaccctatgtatatccctcggcaagcagggccggtgcagcttaccgagctagcaaataga
tttctcaacaatgaggagaagttgaactacgctttctatgtatcaggggaggctcttagt
gtgcccgtaggaacttacatagagaacagaagtgtgtccgtggaggagattttgactata
cagtatcgagaagaagctgttttccgaactcgcccagttagccgtatttctgctagcatt
gctgatcacagggactctgtcttgtgtgtttctttcagtcctgacggtacacaattagca
agtggctcgggtgatactactgtccggctttgggatatctacactcaaactccaatgttt
acatgcagagggcacacgaactgggttatgtcagttgcatggtctccagatggtaagcac
cttgttagtggtgatctagctggtaatatctgtttctggataccgaaaaccggaatgcta
gatggcagacccgttagaggccacaggaaatggattaccagcatctcgtgggagcctgtc
caccttacctacccgtgccgtcggtttgtaacttctagcaaagacgaggacgcgaggata
tgggacatgacgctcaaaaaatctgtaacttgcctcagtggacatacacgtggcgtgact
tgtgtcaaatggggtggagatggtatcatatacacgggttctcaagactgcacgataaag
atgtggcatgttactcccgagggggttgcatgtttgaaagggaaattgaaggagcatggt
cattgggtgaactcccttgcattgagcacagattatgttctccggacaggagcctttgac
cacactggaaaactatattcctcctcctcgcctgaagaagttagaaaggctgcgctcaaa
agatacgaccaagcgaaaggagagtatggcgaaagattggtttcaggttctgatgacttt
accatgattctttgggatccgtctgttagcgatcaatttaaaaagaaattgtccggtcat
cagaagcttgtaaaccatgtgtgcttctcgcctaatggccagtggattgcaagtgcgtcg
tttgataactctgtcaagatatgggatggtatcactggggactttatcacaacttttcga
ggccatattggacctgtttatcaaatcagttggtcccccgacagtaggatgcttttaagt
tgtagcaaagacactactcttaagatatgggatattaaattgagacggttagagaaagat
cttcctggtcataccgatgaggtttatgcagtcgactggagtccagacggtgagaaagta
gtctccggtggtaaagatacttctctgaagctatgggttggttga

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