Raphanus sativus (radish): 108851466
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Entry
108851466 CDS
T06014
Name
(RefSeq) notchless protein homolog
KO
K14855
ribosome assembly protein 4
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108851466
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108851466
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
DSE1_N
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
ASA1
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR41
eIF2A
NLE
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_SPT8
Tricorn_2nd
PD40
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_NOL10_N
Beta-prop_VPS8
Nbas_N
PAC11
Beta-prop_DCAF4
Tricorn_N
RMC1_N
Beta-prop_WDR75_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
108851466
NCBI-ProteinID:
XP_056864490
UniProt:
A0A6J0N883
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All DBs
Position
4:7482006..7484501
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AA seq
474 aa
AA seq
DB search
METGTTVLCRLVDAEGTPLGDPMYIPRQAGPVQLTELANRFLNNEEKLNYAFYVSGEALS
VPVGTYIENRSVSVEEILTIQYREEAVFRTRPVSRISASIADHRDSVLCVSFSPDGTQLA
SGSGDTTVRLWDIYTQTPMFTCRGHTNWVMSVAWSPDGKHLVSGDLAGNICFWIPKTGML
DGRPVRGHRKWITSISWEPVHLTYPCRRFVTSSKDEDARIWDMTLKKSVTCLSGHTRGVT
CVKWGGDGIIYTGSQDCTIKMWHVTPEGVACLKGKLKEHGHWVNSLALSTDYVLRTGAFD
HTGKLYSSSSPEEVRKAALKRYDQAKGEYGERLVSGSDDFTMILWDPSVSDQFKKKLSGH
QKLVNHVCFSPNGQWIASASFDNSVKIWDGITGDFITTFRGHIGPVYQISWSPDSRMLLS
CSKDTTLKIWDIKLRRLEKDLPGHTDEVYAVDWSPDGEKVVSGGKDTSLKLWVG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggagacggggacgactgtgttgtgtcggttagtagacgccgaaggaactcctttaggt
gaccctatgtatatccctcggcaagcagggccggtgcagcttaccgagctagcaaataga
tttctcaacaatgaggagaagttgaactacgctttctatgtatcaggggaggctcttagt
gtgcccgtaggaacttacatagagaacagaagtgtgtccgtggaggagattttgactata
cagtatcgagaagaagctgttttccgaactcgcccagttagccgtatttctgctagcatt
gctgatcacagggactctgtcttgtgtgtttctttcagtcctgacggtacacaattagca
agtggctcgggtgatactactgtccggctttgggatatctacactcaaactccaatgttt
acatgcagagggcacacgaactgggttatgtcagttgcatggtctccagatggtaagcac
cttgttagtggtgatctagctggtaatatctgtttctggataccgaaaaccggaatgcta
gatggcagacccgttagaggccacaggaaatggattaccagcatctcgtgggagcctgtc
caccttacctacccgtgccgtcggtttgtaacttctagcaaagacgaggacgcgaggata
tgggacatgacgctcaaaaaatctgtaacttgcctcagtggacatacacgtggcgtgact
tgtgtcaaatggggtggagatggtatcatatacacgggttctcaagactgcacgataaag
atgtggcatgttactcccgagggggttgcatgtttgaaagggaaattgaaggagcatggt
cattgggtgaactcccttgcattgagcacagattatgttctccggacaggagcctttgac
cacactggaaaactatattcctcctcctcgcctgaagaagttagaaaggctgcgctcaaa
agatacgaccaagcgaaaggagagtatggcgaaagattggtttcaggttctgatgacttt
accatgattctttgggatccgtctgttagcgatcaatttaaaaagaaattgtccggtcat
cagaagcttgtaaaccatgtgtgcttctcgcctaatggccagtggattgcaagtgcgtcg
tttgataactctgtcaagatatgggatggtatcactggggactttatcacaacttttcga
ggccatattggacctgtttatcaaatcagttggtcccccgacagtaggatgcttttaagt
tgtagcaaagacactactcttaagatatgggatattaaattgagacggttagagaaagat
cttcctggtcataccgatgaggtttatgcagtcgactggagtccagacggtgagaaagta
gtctccggtggtaaagatacttctctgaagctatgggttggttga
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