Raphanus sativus (radish): 108851471
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Entry
108851471 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108851471 isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108851471
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
108851471
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
108851471
NCBI-ProteinID:
XP_056865303
UniProt:
A0A9W3DNB2
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Position
4:complement(38953218..38956857)
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AA seq
634 aa
AA seq
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MGASEALTDPSSLYDAGNVEFSDTYTMLTVRNALASVQNGESDIYDELVQSMQISKGSDH
AMWADLVTILNALSGSVACIDITHHRKLLSSVFGMSLWDLKPHVMDALVGLLISLAATSG
KYLDSCLNMLIGHFVPPRWVMDRLSQRRVIDQKIDVLSRVHEALLKISLLVPLAPSRLLP
MLAQQMPKMNKKDNVSLFFYLWLISYVLAINCFILFQVVVMYVENLFKLESSPIGQVGGS
MIFMMVMERLRDLDLEIDWDHILQDDSSRGMFDMELEDVVEEDTMNEGEELPVGSLNQNT
WGGNVVFESLDKLMVISFDHLESCNLAGRLDQVFEKLFGSFENFILNTYKSKVSQFLMFY
ACSLDPENCGVKFASKLMDIFLSTNKPRPTRMSAVAYLASYLARGKFLPVSYVATMLKRL
VDVCADYCRTCNDDIRPEAHQIFYSGCQAIMYVLCFRMRSILNVPLFRSQLIPLESILMH
KLNPLMVCLPSVVAEFLKQAKAGGMFVVSDSFIFDDLLESELSRAFGGCERLDTFFPFDP
CLLKSSNSYISPNFIYWSMVRPTYEEDDDDDEDDAEIIVNGDEESDEEEEGDVDYAMNKM
SITPKHSFKNKMERERLLKMPSMIRPSISPPQSF
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatcagaggctctaactgatccatcaagcctatacgatgctggcaacgtcgaa
ttttccgacacgtatacgatgcttaccgtgagaaacgcacttgcatctgtccagaatggg
gaatcagacatttacgatgagctcgttcagtctatgcagatcagcaaaggatctgatcat
gctatgtgggctgatcttgtgactatcttgaatgctttatcaggctctgtggcttgcata
gatatcactcaccatcgcaagcttctttcttcggtttttggaatgtcactgtgggatctc
aaacctcatgtcatggatgcattggtgggcctactcatatcactggctgctactagtggg
aagtatctggactcttgtctgaatatgctcataggccacttcgtgccaccgcgttgggtg
atggatagactttcgcaacgccgtgttatcgaccagaagatagacgttctttctcgagtt
cacgaagcccttctcaaaatctctcttttggttcctcttgctccctcgagattactgccc
atgctcgctcagcagatgcccaaaatgaacaaaaaagacaatgtgagtctttttttttat
ctttggttaatttcatatgtgcttgcgataaactgttttatcctcttccaggtggtagtg
atgtatgtggagaacttattcaagttggagagcagcccgatcgggcaagttggtggcagc
atgatttttatgatggtgatggagaggctgagagatttggatttggagattgattgggat
catattctgcaagatgactctagtagaggcatgtttgatatggaacttgaagatgtagtt
gaagaagacactatgaatgaaggagaagagcttccagtgggatcgctgaatcagaataca
tggggtggaaatgtagttttcgagtctttggacaaattgatggtcatatcttttgatcat
cttgaatcatgtaaccttgctggtcgtttggatcaggtgtttgaaaagctcttcgggtca
tttgagaacttcattctgaatacatacaaatcaaaagtttcgcagtttctgatgttctat
gcatgttcactggatcctgaaaactgtggtgtgaaatttgcgagtaagctgatggacatt
tttctctccaccaacaagcctcgacctactaggatgagtgcggttgcttatctagctagc
tacttggctcgtggaaagtttttgcctgtttcctatgtggctaccatgttaaaaaggttg
gtagatgtgtgcgcggattactgtagaacttgcaatgatgatattaggcctgaagcacat
cagattttctactccggatgccaggcgatcatgtatgtgctctgcttccggatgagatcc
atcctaaacgttcctctctttcggtcccagcttataccattggagtcaatcttaatgcac
aaactaaatccattgatggtatgccttccatctgtagttgcagagttccttaagcaagct
aaagcaggtggcatgttcgtagtctcagactcgttcatttttgatgacttacttgagtct
gagctttctcgtgctttcggcgggtgtgagaggcttgatacattcttcccctttgaccct
tgcttgctgaaaagctctaacagctatatctccccgaatttcatctactggtcgatggtg
agaccgacatatgaggaagatgacgatgatgatgaggacgatgctgagataattgtgaac
ggggatgaggagagtgatgaagaggaggagggtgatgttgattacgccatgaacaagatg
tccataacacctaagcactctttcaagaacaagatggaaagagaaagacttctgaaaatg
ccttccatgatcagaccttccattagtcctcctcaatccttttga
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