Raphanus sativus (radish): 108851622
Help
Entry
108851622 CDS
T06014
Name
(RefSeq) disease resistance protein RPP2A
Organism
rsz
Raphanus sativus (radish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
TIR
Med26
LRR_4
B3
LRR_3
LRR_8
TIR_2
AAA_16
NACHT
zf-CCCH
zf_CCCH_4
nSTAND3
Motif
Other DBs
NCBI-GeneID:
108851622
NCBI-ProteinID:
XP_056863755
UniProt:
A0A9W3DIX6
LinkDB
All DBs
Position
4:complement(6550214..6555975)
Genome browser
AA seq
1366 aa
AA seq
DB search
MEEMKAFCEFLSHRQPPRSLSESTADDAIEYLRTLPPDRFNKAVSRLSEATFNEIDGDHP
FNSPMVTTFLHERVKANEQANEEEDGDKKRGGKSDGDQEILLEKYLTTSDLSNLDTHVAA
VDEDFGKYFLLATERILRVEDEEGKPWQFGFSDLKVTQRYVLTKGWSNYVKEKQLVAGDF
VFLQRLYTDSSRLFIGFRRRQASALGQCQDLTSLATSSEQLKEVETPPQLRSHGRHVTEL
DPVLVISCGENQDSEERYFISYISKELCLRGFTPLIYDLTRSTLTAGLEMLHSSRVGVII
FSKNYVCSRQCQDEFVAIMDHSKANNLVLLPVFFKVEVTDIRGQSGSFGRAFSRLEYSVL
ASQAPYLTSINKYQYKKGDEVLLAKNIVRDVCFLLNPDTNMNLRGRLQMKSILSLLNFSQ
FSAPHIVGLWGMAGIGKTTIAREIFGTQAERYEVCYFLPDFHIVCQTRGLSHLRDEFFSK
ICGEEKVIVDAYDTKLGFIRDRFLGKKLLIVLDGVSNARDAEFLVGGFGWLSGGHTLILT
SRNRQVLVQCNAKEIRKIQKLSEPESLHLFSQFATEQNWKERTSLVTELVNYASGIPLAL
CALGSSLQNQCINEEKQHLKGLRQHPLVEIQDAFKISFSVLDDNEKNTFLDLACFFRGER
KDHVVNILDGCGFITDLGIYGLIDESLISLVDNKIEMPNIFQDTGRFVVCQESNETGKRS
RLCDPTDIVDVLTNNSGTEAIEGIFLDASGLTVELSPTAFEKMYRLRLLKLYSPTSKTHC
NVCLPQGLYSLPDELRLLHWERYPLGSLPRNFNPKNIVELNMPYSNMTKLWKGTKNLEKL
KRIILSHSRQLTKFPRLSKAKNLEHIDLEGCTSLVKVNSSILHHQKLTFLSLKDCSRLRS
MPATVHLEALEVLNLSGCSELEDLQDFSPNLSELYLAGTAITKMPSSIGGLTRLVTLDLE
NRNRLQHLPPEISNLKAVVSLRSKRPASSIDLSSVEDTAPPHKRCRLKGVIESVILSLRK
KKRESSVSRVNEETEKEKEVREKLVDGNNNDDFDPFAAFWDDRQKSILKIQEKLEDPDLS
EEALVELLQKLEYVDITLEDLQGSNIGRVVNQKRRHRSPIVQRLAQQLINKWKRMVEKFL
RLKPGDFQSPSLIGKRTDCNSESQNKHNPYPFPHPKDRETSVPEGSLNLKGLFPIRPGKP
VCASYFHTGNCSSGSTCIFDHPSLMPVHKNTSLPLIQRFSSSMGDSSSDLVNPATSKRRI
QKNTSSMASETEHLNQRGFSYSIGDSSSELVEASTKKPPIHKKTSSLVPQMPYFNPQGFS
YSIGDSSSELVETSTMSEVTHTNVGRDTSDSWDDEEDTQFLNWLHL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatgaaagctttctgtgagttccttagccatcgtcaacctccccgttcactc
tccgagagcactgctgatgacgccattgaatatctccggactctgcctcctgacagattc
aacaaggccgtgagccgcctcagcgaagctaccttcaatgagatcgacggagaccatcca
tttaacagcccaatggttacaacttttttgcacgagcgtgtgaaagccaatgaacaggct
aatgaagaagaagatggcgataagaaacgaggaggtaaatctgacggcgaccaggagatt
ctcttggagaaatatttgacaaccagcgatctcagtaacctagacactcatgtcgccgcc
gtcgacgaggacttcggtaagtactttctcttagccactgaacgaatccttagagtagag
gatgaggaaggaaagccatggcagttcgggttctcagacctcaaagttacccaacgctac
gtcttgaccaaaggttggagcaactacgttaaggagaagcagcttgttgcaggagacttt
gttttcttgcagcggctttatacagacagcagtagactcttcattggctttagaaggcgc
caagctagtgctctcggacagtgtcaggatttaacgtcactggccacatcctctgagcag
ctcaaggaagttgaaactcctccccagctaagaagtcatgggcgtcacgtcacagagctt
gaccctgttttagtgatttcttgtggtgaaaatcaggactccgaggagagatacttcata
agctacatctccaaagagttgtgtctccgtggcttcacccctttgatatatgatctaact
aggagcacattgactgcgggtctggagatgctacacagctcacgggttggtgttatcatt
ttctcgaagaactatgtttgttctagacagtgccaggatgaatttgtggcaatcatggac
cattcgaaagcaaacaaccttgtgcttcttccagtgtttttcaaagtggaggttacggac
attaggggtcaaagtggctcctttggaagagcattctcacgacttgagtattcagttctg
gcatcccaagctccctatttaacttccatcaataaatatcagtataagaaaggggacgag
gttttacttgccaagaatattgttagagatgtctgttttctgctcaatcctgacactaac
atgaacctaagaggaaggcttcaaatgaagagtatattgtctttactcaatttttctcag
ttctcagccccacatattgttggactttggggtatggctggcatagggaaaactaccatc
gctagagaaattttcggaacacaggctgagagatatgaggtctgctactttctgccagac
ttccatatagtgtgtcaaacgagaggactgagtcatctgcgtgatgaattcttctcaaaa
atctgtggggaagaaaaggttattgtagacgcatatgacacgaaactaggtttcataagg
gataggttccttggtaaaaagctcctcattgttcttgatggtgtgagtaatgctagagat
gcagaatttttggttggagggtttggctggctttctggtggacatacactcatcttaaca
tctcggaataggcaagttctggtacagtgtaacgctaaagagattcgcaaaatccagaaa
ctatccgagcctgaatctcttcacctattctcccagtttgccactgaacaaaattggaag
gaaaggacgtcattagtcacggagctggtgaactacgctagtgggataccattggctctg
tgtgccttaggttcctccttacagaatcaatgtattaacgaagagaagcaacacctcaaa
ggattgcgtcaacatcctttagttgagattcaggatgcattcaaaataagttttagtgta
ctagatgacaacgagaagaatacatttttagacctcgcatgttttttccgtggggagaga
aaagatcatgtagtgaacatccttgatggttgcggttttattacagatttaggaatctat
ggtctcattgatgaatctctcatcagccttgtagataacaaaatagaaatgcccaacatt
ttccaagacacgggtcgatttgttgtttgtcaagagagtaatgagacagggaagcgtagc
agactgtgtgatcctactgacattgttgatgtgctgaccaacaactcaggaacagaagca
attgaaggcatatttctggatgcatctggcttgacagttgagctgagtcctactgctttt
gagaagatgtatagacttagattgctcaagctctacagtcctacttctaaaacccattgc
aatgtatgtctacctcaaggcctttactctttacctgatgagctacgtctactccactgg
gaacgatatcctctaggatccttacctcggaacttcaatcctaaaaatattgtagaactg
aacatgccctatagcaacatgacaaaactatggaagggaacaaagaatctcgagaagctg
aagaggatcattctgagtcactcccgacagttgactaaattcccaaggctttcaaaggcc
aagaaccttgagcatattgatcttgaaggatgtacgagtctggttaaggttaactcatct
attcttcatcatcaaaagcttactttcttgagtctgaaagactgttcacgtttgcgaagt
atgcctgccacggttcatttagaagctcttgaagttcttaatctatctggctgctcagag
ctcgaggatcttcaggatttctcaccaaaccttagtgagctgtatctcgctgggactgcc
attacaaaaatgccatcttcaatagggggtctaactagacttgttacactagatctggag
aatcgtaatagacttcagcatctgccaccagagataagtaacctgaaagctgtggtcagt
cttaggtcaaaacgccctgcttcttccattgatctatccagcgtggaggatacagcacca
ccacataagagatgccgattgaagggtgttattgaatctgttattctgagcttaagaaaa
aagaagcgagaaagtagtgtctctagggttaacgaggagacagagaaggaaaaagaagta
agagagaaattggttgatggtaacaacaatgacgatttcgatccgtttgctgctttctgg
gatgataggcagaagagtattcttaaaattcaggagaaacttgaagatcctgatctgtct
gaagaagctttggttgagttgcttcagaaactggaatatgttgacataacactggaagat
cttcagggaagtaatatcgggcgggttgtgaatcaaaagcggaggcatcgatcgccaatt
gttcagagattagctcaacagcttatcaataaatggaagcgaatggtagaaaaattttta
agacttaagcctggtgatttccaaagtccgagtttaataggtaaaagaacagactgcaac
tctgaatctcagaacaagcataatccctatccatttcctcatccaaaagacagggaaacc
tctgttcctgagggttccttaaacctcaaaggcctcttccccatacgcccgggaaaacct
gtgtgtgcctcgtattttcacactggaaactgcagctccggttctacttgcatttttgat
cacccatcgttgatgccagtccacaagaacacatctttgcccttgattcagcgattttct
tcttcaatgggagattcatcaagtgaccttgtgaacccagcaactagtaaacgaagaata
cagaagaacacatcttccatggcttctgagacagagcacttgaatcagcgaggattttct
tattcaattggagattcatcaagtgagcttgtggaagcatcaactaagaaacctccaata
cacaagaaaacgtcgtctctggttccacagatgccgtatttcaatccgcaaggattttct
tattcgattggagattcgtcaagtgagcttgtggaaacatcaactatgtctgaggtaaca
cacacaaacgttggtagagacacctctgattcatgggatgatgaagaagacactcagttt
ttgaactggttgcatctatga
DBGET
integrated database retrieval system
