KEGG   Raphanus sativus (radish): 108851688
Entry
108851688         CDS       T06014                                 
Name
(RefSeq) uncharacterized protein LOC108851688
  KO
K11790  denticleless
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108851688
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108851688
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_DCAF12 EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 WD_LRWD1 WD40_RFWD3 Beta-prop_WDR75_2nd MIOS_WD40 Beta-prop_Nup120_160 Beta-prop_Vps41 TAF1C_beta-prop WDR54
Other DBs
NCBI-GeneID: 108851688
NCBI-ProteinID: XP_018480654
UniProt: A0A6J0N831
LinkDB
Position
4:complement(13039340..13042530)
AA seq 509 aa
MENSRSRSVFVNIGLRELNGFRVRKRPFFADSELVCREIAGVAVEHDGYRTPPLAVSFCK
SSRNSQVFAVSDEDGHVSLFHSNRNFDSSATHQENTENARFRDWIAHNNAVFDVSWIKDD
SCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDI
RCKSSSQKEEFCINSTGMVKGAHLSPLSKRTGRRKAASSSITSVLYLKDEVTIATAGAPD
SALKFWDTRKLRVPIAQASPQSDSTNTTEKRAHGIVSLSQDSSGTFLTASCKDNRIYLYN
ILQLDKGPVQSFSGCRIDSFFIRTMISPDGEHILSGSSDGNAYIWQVNKPHVDPTVLKGH
DKEVTAVDWSPSEIGKVVTASDDFTVRLWNIEINRCSNTNATASGSRVKRRVTALSNTEA
KERLETNKEPESPQKQSSDNQSMPNIRTPEAQLKKTSLSSSSTLSLSSLEEDKMCENTPE
TAVNSPSSVLNPPSSVKRRTIRDYFLVTP
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggaaaactccagatctagatccgtcttcgtcaacatcggactaagagagctcaacgga
ttccgagtaaggaagcgaccgttcttcgcagactccgagctggtttgcagagaaatagcc
ggcgtagctgtggaacacgacggctatcggactcctccgttggccgtttcgttttgtaag
agtagcaggaactcacaagtgttcgcggtgtcagatgaggatggacatgttagcttgttt
cattcgaatcgcaattttgactcttctgcgactcaccaagagaacacagagaatgctagg
tttcgtgactggattgctcataataatgcggtcttcgacgtttcttggatcaaggatgat
agttgtcttctgactgcttctggtgatcaaactattaaagtatgggatgttgaggagaat
aaatgtactggagtacttataggacacacaggaactgtgaaatcaatgtgttcacatcca
actaattctgatcttcttgtctctggttcgagagacggatgttttgcgctatgggatata
agatgtaaaagtagctctcaaaaagaggagttttgcatcaactctactggcatggttaaa
ggtgcccacctctctcctctttcaaaacgaactggacgtcgcaaggctgcttcatcaagc
attacctctgtgctttatctcaaggacgaggtcacaattgctactgctggagcgccagat
agcgccttgaaattttgggatacaagaaagctgagagttcccattgctcaagcatcacca
cagtcagactcaacaaacactacggaaaagagagctcatggtattgtatccctgtcccaa
gactcaagtggaacctttcttactgcatcatgcaaggacaacagaatctatctgtacaac
atactgcagcttgacaaaggacctgtacaatcattctctggttgccgaatagattccttt
ttcattaggacaatgattagccctgatggtgaacacattttgagtggttcaagcgacggt
aacgcttacatatggcaggtgaataagcctcatgtagatcctacagtcttgaaaggccat
gacaaagaagtaactgctgttgattggtctccatcagagatcgggaaggtagtgacagct
tcagatgacttcacggtacgactgtggaacatagagatcaaccgttgctctaatacaaac
gcaacagcatctgggtctagagttaaacgcagagtaaccgcattgtcaaatactgaagcc
aaagaaagacttgagacgaacaaagaacccgagagtccccaaaagcaatcatcagataat
caatctatgcctaacatcagaactccagaggctcagttgaagaaaacatctttatcatca
tcatcaacactgtcgttatcatcattagaagaagataaaatgtgcgagaatacaccagaa
actgcggtcaacagtccatcatctgtcctaaaccctccttcctctgtcaaaaggcgaacc
attagagattatttccttgtcactccctaa

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