Raphanus sativus (radish): 108852090
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Entry
108852090 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108852090 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108852090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108852090
03012 Translation factors [BR:
rsz03012
]
108852090
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108852090
Translation factors [BR:
rsz03012
]
Eukaryotic type
Release factors
108852090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
EF-G_D2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
108852090
NCBI-ProteinID:
XP_056864879
UniProt:
A0A9W3DM77
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Position
1:complement(7978720..7983864)
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AA seq
547 aa
AA seq
DB search
MDIEDDIRALQLDSAEENNGAGVVIPADQNTDGAEILDKMEEDLKDEIRESAPVPDVQQA
SEDHDQEVLHPVHNPAKVNLTKEKAAQEKAAKEEAEEEAEANKKRHLNVVFIGHVDAGKS
TIGGQILFLSGQVDDRQIQKYEKEAKEKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFE
TETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAK
TLGVSKLVVVVNKMDDPTVNWSKERYDEIEQKMVPFLKSSGYNTKKDVIFLPISGLMGIN
IDKSMDRNVCPWFSGPSFFEVLNAIEVPPRDPNGPFRMPIIDKFKDMGTVVMGKVESGSI
REGDSLIVMPNKEPVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILAGFVLSSTVKP
VPAVTEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELISQIDMKTRKPMKKKI
LFVKNGAAVVCRIQVSNSICVEKFSDFPQLGRFTLRTEGKDCLDYQIQWKTIAVGIVTAL
SGASSSA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaggatgatatccgcgctttacagcttgattccgcagaagaaaacaatgga
gctggagttgtcattccggcagatcagaacacagatggagctgaaatattggataaaatg
gaagaagaccttaaagatgagattcgagaatcggcaccagtccctgatgtgcaacaagca
tcagaggatcatgatcaggaagttctccatccagtgcacaacccagcgaaagttaattta
actaaggagaaggcagcccaagagaaggccgccaaagaggaagctgaagaggaggcagag
gcaaacaagaagagacacttgaatgtggtgttcattggacatgttgatgctggaaagtct
acaattggaggacaaatcctcttccttagcggccaggttgacgaccgacaaatccaaaag
tatgaaaaggaagcaaaagaaaaaagtagagaaagctggtatatggcatatataatggat
acaaatgaagaagagagggccaagggtaaaactgttgaagttggaagggctcattttgaa
actgagaccactagatttacaattctggatgctccgggtcataagagttatgtaccaaat
atgattagtggagcatctcaggcggacattggtgtgctggtgatatcggctcgtaaaggt
gaatttgaaacaggatatgagaggggtgggcagacacgtgaacatgttcaactcgcaaaa
acactgggcgtgtcaaagctggtggttgttgtcaacaagatggatgacccaactgttaac
tggtcgaaagagaggtacgatgaaatagaacagaaaatggtgccatttcttaaatcttct
ggctacaacacaaagaaagatgttatcttcctgcctatatctggtctaatggggattaat
atagacaagagtatggatcgaaacgtttgtccttggttcagtggccctagcttttttgaa
gtcctcaatgctattgaagttccgccacgggatcctaatggtccattcaggatgcccatt
attgataaattcaaagacatgggaactgttgttatgggaaaagtagaatctggcagcatt
cgagagggtgattccttgattgttatgccaaacaaggaacccgtgaaagttgttgctata
tattgcgatgaagataaagttaagcgtgctggaccgggtgagaatttgagagtccgtata
actggcattgaagacgaggatatccttgcaggttttgttttatcaagcacggtaaagcct
gtacctgccgttactgagttcgttgcccaattacaaatccttgagctacttgacaatgcg
atttttacagctggttacaaggctattctccacattcatgcggttgttgaggaatgcgag
ataattgaattgataagccaaattgatatgaagaccaggaaacccatgaaaaagaaaatt
ctgtttgtgaagaatggtgctgctgttgtctgccgtatacaggttagcaattcaatctgt
gtggaaaaattctcagatttcccgcaacttggaagattcactctacgaactgaaggtaaa
gattgtctagactatcaaattcaatggaaaacaattgctgttggaatagtgactgcgctc
tcaggtgcttcctcaagcgcttga
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