Raphanus sativus (radish): 108852134
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Entry
108852134 CDS
T06014
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108852134
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108852134
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
108852134
NCBI-ProteinID:
XP_018481135
UniProt:
A0A6J0N9F3
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Position
4:complement(14640736..14643970)
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AA seq
473 aa
AA seq
DB search
MANTRNIYDNNGVGSEDTTVYRYLCPARKAGSIIGKGGEIAKQMRSETKANMRINEALPG
CDERVVTIYSTSEETNCIGGDDDDDEEFACPAFDALLKVHDMVVAEEVGGDCYGDEYSSE
KQITVAARMLVASDQIGCLIGKGGQVIQKLREETNAQIRVINDNLPLCALALSHDELLQI
IGEPFAVREALYQVASLLYDNPSRFQHYFLSSSSSLQQSGGMLMSPPPLTSSHRNYSSSR
DVADVREFSICFICPAENIGGVIGKGGSFINQIRQETGAVIKVNTYEADEDDDCIIFISS
KECFEDQSPTVNAALRLQTRFSEKVGKDSTDSAISTRVLVPSSRVGCLIGKGGAIISEMR
SVTKANIRIVQGEDVPQIAREDEEMVQITGSLDAAIKALTQVMLRLRASVFDMDRGLVLL
PTFFPYISQATETSSKPKQRKRENHSRGSVETARNDDYGYQMNSNSHRRNHVY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctaatacgaggaacatttatgataataatggtgttggatcagaagacactactgtg
tatcgttacctgtgtcccgcgaggaaagcagggagcattatcggtaaaggcggcgaaatc
gctaagcagatgaggtccgagacgaaagcgaacatgaggatcaacgaggctttacccggt
tgcgacgagcgtgttgtgactatttactcaactagcgaggagacgaattgcattggagga
gatgatgatgatgatgaggagtttgcttgtcctgctttcgacgcgcttctcaaggttcat
gatatggttgttgctgaagaagtgggcggtgattgttatggtgatgagtatagtagcgag
aaacaaataacggttgctgcgaggatgcttgtggcttcggatcagattggttgccttatt
gggaaaggtggacaagttatacagaaactgcgtgaggagacaaatgctcagattcgtgtt
ataaacgacaatctgcctctttgtgctttggctttgagccatgatgagcttcttcagata
attggagagccctttgctgttagagaggctctttatcaagttgcatctttgctttatgat
aatccgtcgcggtttcagcactactttctgtcttcttcaagtagcctgcagcagtccggt
gggatgctaatgagtcctcctccactgacgagctctcacagaaactactcttcgtcgaga
gatgttgctgatgtaagagagttttctatctgcttcatctgcccagctgaaaatattgga
ggtgttatagggaaaggaggcagtttcattaatcagattaggcaagaaactggtgctgtc
attaaagtcaatacctatgaagctgatgaagatgatgactgtatcattttcatatcatca
aaggagtgcttcgaagaccaatctccaacagtgaatgcggcattacgtttgcaaacgcga
ttcagcgagaaagtagggaaagactcaacagattctgcgatatccactcgtgttcttgtt
cctagttcacgagtagggtgtctcattgggaaaggtggggctattatatccgagatgagg
agtgtcacaaaagccaatatccgaattgttcaaggcgaagatgtaccgcaaattgctcgc
gaggacgaggagatggtccagataactggaagtcttgatgcagcaatcaaggcactcacg
caagtgatgttaagattaagagctagtgtgttcgacatggatcgtggtcttgtcttgctt
ccaacgttctttccttatatatctcaagcgacggaaacttcgagcaagccaaagcagagg
aaacgggagaaccattctcgtggttcagtggaaactgctagaaatgatgactatggctac
caaatgaactcaaattcccatagaagaaatcatgtatattga
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