Raphanus sativus (radish): 108852201
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Entry
108852201 CDS
T06014
Name
(RefSeq) transcription factor MYB78
KO
K09422
transcription factor MYB, plant
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108852201
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
108852201
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DAP_DH_C
Motif
Other DBs
NCBI-GeneID:
108852201
NCBI-ProteinID:
XP_018481208
UniProt:
A0A6J0NBI4
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Position
4:11550692..11552870
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AA seq
322 aa
AA seq
DB search
MDGKIRLGINKNMGDLQNNVDDEMDLRRGPWTVEEDFKLSNYISTLGEGRWNSLARCAGL
KRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKN
YWRTRVQKHAKQLRCDVNSQQFKDTMRYLWMPRLVERIQAASASSTTGSAAKSCVATTTD
QLVITSYDEGANNNTTNIDHLGLTSNPNGYVSNVSRETSSLKVSPGSGLTDYHMGSEVEK
VETSQNLVGPQIMSPSQNYLDDKSGLLNGVLAVMQEESYPNLFENMNGMIPSYSDSFWNI
GSDEDFWLLQQQQQQLLNHGSF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaaaatacgcttagggatcaacaagaacatgggagacctccagaacaacgtg
gatgacgaaatggacctaaggagaggtccatggacggttgaggaagatttcaagctcagc
aattacatttctactcttggagaaggccgatggaactctctagctcgttgtgccggactc
aaaagaaccggaaaaagctgcagattacggtggttgaactatcttcggccagatgtccgc
cgtggaaacataacccttgaagaacaactcttaattcttgaacttcactcccgttggggc
aatagatggtctaagattgcacaatatttaccaggaagaacagataacgagatcaaaaac
tattggagaacacgtgtgcaaaagcatgcaaaacagcttagatgcgacgttaacagtcaa
cagtttaaagacactatgaggtatctttggatgcctcgtctcgttgagcggatccaagcc
gcctccgcttcatccaccactggttctgctgccaagtcttgcgtcgccaccaccacggat
cagttagtgatcacgtcatacgacgagggagccaacaacaacaccaccaacatagaccat
ttgggtttaacgagcaaccctaatggttatgttagtaacgtctcgcgggaaacttctagc
ctgaaagtatctccggggtccggactgacggattatcatatgggtagtgaagtggaaaag
gtcgagactagtcagaatttggtgggtccacaaatcatgtcgccatcgcagaactatctg
gatgataaaagtggattattgaacggagttttggcggtaatgcaggaggagagttatcct
aacttgtttgaaaatatgaatggaatgataccttcttattcggacagtttctggaacatt
ggaagtgatgaagacttttggctcttacagcaacaacaacagcagctcctcaaccatgga
agcttctga
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