Raphanus sativus (radish): 108852241
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Entry
108852241 CDS
T06014
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5 isoform X1
KO
K25871
zinc finger protein IDD14/15/16
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108852241
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108852241
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
Zn_ribbon_4
zf-C2H2_4
zf-met
zf-H2C2_2
DUF2514
Motif
Other DBs
NCBI-GeneID:
108852241
NCBI-ProteinID:
XP_018481246
UniProt:
A0A6J0NAL0
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Position
4:complement(15086775..15089610)
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AA seq
452 aa
AA seq
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MKTDQGAVVMLDDAASNKNTTNTRCVVFSSSEPFLSSSENGVTTTKTSTQKRKRRPAGTP
DPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDSNIEVKKR
VYVCPEPTCFHHDPFHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTC
GTRGHSCDCGRVFSRVENFIEHQDNCSVRNVRQEPPPPPQTAVIVTACSSRTASTASTPS
TETNYGGAAVVATPLPLEGRPIHIRNSSLAPLALTNSSNLNLELQLLPLTPNINPNQQNQ
QHQVKEPSLHHHHHSHDATSLNLSIAPSSSYHHYNNFDRIKEIIASEQIMNVAMKEKASA
EEAKREAKRQREIAENEFENAKKIRQQAQTELKRAKLLKEQSMKKISSTIMQVTCQTCKG
QFEVVPAAATEETSLVVSYMSSTNTDGGDHRV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagatcaaggagcagtggtgatgttggatgatgctgcttccaacaagaacact
actaacacacgctgtgtggttttttcttcttctgaacctttcctctcttcttcagaaaat
ggggtcaccaccacaaagacgtccactcaaaagaggaaaagaagacctgcaggtacacca
gatccagatgcagaagttgtgtcactatcaccaagaactcttcttgaatcagatagatac
atatgtgagatctgtaaccaagggtttcaaagagatcaaaatctccagatgcatcgaaga
cgtcacaaggttccatggaagcttctgaagagagacagcaacatagaggtgaagaaacga
gtctatgtttgccctgaacccacttgttttcaccatgatccttttcatgctcttggagat
cttgtcggaataaaaaaacatttcagacgaaagcacagcaaccataagcagtgggtttgt
gagaaatgttctaaaggttatgctgttcaatcagattacaaagctcatctcaaaacttgt
ggcactagaggtcattcttgtgactgtggtcgcgtcttctccagggtggagaattttatt
gaacatcaagataactgttctgtaaggaacgttcgccaggaaccaccgccaccgccacaa
accgccgtcattgtcacggcctgctcctctagaaccgcctcaacggcaagcactccatct
accgaaacgaactacggtggtgcggctgtggttgcgactcctctacctttagaaggacgt
ccaattcatatcagaaactcatctttagcgcctttagctctcaccaactcatcaaatctc
aacctcgaacttcagcttcttccattgacgccaaatataaaccctaatcaacaaaaccaa
caacaccaagttaaagaaccatctcttcatcatcatcatcatagtcatgacgccacaagc
ttaaacctctccattgctccatcatcatcctatcatcactacaacaattttgatcgcata
aaagaaataatagcgagtgaacagatcatgaatgtagcgatgaaggagaaagcttctgcg
gaggaagctaaaagagaagcaaagagacaacgagagatagcggaaaatgagtttgagaat
gcgaagaagataaggcaacaagcacaaactgagcttaagagagctaagcttttaaaggaa
caatctatgaagaagataagctcaacgattatgcaagttacttgtcaaacttgcaaagga
cagtttgaagtggttcccgcagctgcgacggaagagacatctcttgtggtgagttacatg
tcgtcaacgaatactgacggaggggatcatagagtttga
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