Raphanus sativus (radish): 108852425
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Entry
108852425 CDS
T06014
Name
(RefSeq) cellulose synthase-like protein D1
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108852425
Glycosyltransferases [BR:
rsz01003
]
Polysaccharide
Structural polysaccharide
108852425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
Glyco_trans_2_3
MerT
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
108852425
NCBI-ProteinID:
XP_018481433
UniProt:
A0A6J0NC40
LinkDB
All DBs
Position
4:complement(38210636..38214128)
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AA seq
1023 aa
AA seq
DB search
MASSPPKKTLNSQSSSLNRPPQAVKFGRRTSSGRSVSLSRDDDMDVPGDSSSQTDYINYT
VHMPPTPDNQPAGSSGSTPAPRNKMERRLSVMKSNNKSMLLRSQTGDFDHNRWLFESKGK
YGIGNAYWSEEDENYDGGVSMSDFFDKPWKPLTRKVQIPAKVLSPYRLLIVCRLVVLFFF
LWWRIANPNEDAMWLWGLSIVCELWFAFSWILDILPKLNPINRATDLDALHDKFEQPSPS
NPTGRSDLPGVDVFVSTADPEKEPPLVTANTLLSILAVDYPIEKLSAYISDDGGAILTFE
AMAEAVRFAEYWVPFCRKHDIEPRNPDSYFNLKKDPTKNKKKPDFVKDRRWVKREYDEFK
VRINGLPEQIKKRAEQFNMREQLKERRIAKEKNGGVLPPDGVEVVKATWMADGTHWPGTW
FEPKPDHSKGDHAGILQIMSKVPELEPVMGGPNEGALDFTGIDIRVPMFAYVSREKRPGF
DHNKKAGAMNGMVRASAILSNGAFILNLDCDHYIYNSKAIKEGMCFMMDRGGDRICYIQF
PQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPVYVGTGCMFRRYALYGFNPPRANEYS
GVFGQEKAPAMYARTQSGASQNSQNSQTSDIESDTQPLTDDPDLGLPKKFGNSTVFTDTI
PVAEYQGRPLADHMSVKNGRPPGALLLPRPPLDAPTVAEAIAVISCWYEDNTEWGDRIGW
IYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFS
KNNAIFATRRLKFLQRVAYLNVGIYPFTSIFLVVYCFLPALCLFSGKFIVQSLDIHFLSY
LLCITITLTLISLLEVKWSGIGLEEWWRNEQFWLIGGTSAHLAAVVQGFLKVIAGIEISF
TLTSKAAGEDEDDAFADLYIVKWTGLFIMPLTIIVVNLVAIVIGASRTIYSVIPQWNKLL
GGMFFSMWVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISPPDDATGGGG
ISV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagtccacccaaaaagacattaaactcccaatcctcttctttaaaccggcca
ccacaagccgtcaagtttggtcgccggacgtccagtggccgctctgttagcctttcccgc
gatgatgacatggacgtccctggagattcctccagccaaaccgattacatcaactacacc
gtccacatgcctcctacaccggacaaccaacccgctggctcctccggctccacccctgca
cccaggaacaagatggagaggagattatccgtcatgaaatcgaataacaagtcaatgctg
ctgaggagccaaacgggagactttgatcataacaggtggttgtttgaatctaaaggtaag
tacggtataggaaacgcgtattggtcggaagaggatgaaaactatgacggtggtgttagc
atgtctgattttttcgacaaaccgtggaaacctctcaccagaaaagttcagattcccgcc
aaagttcttagtccttacaggttattaatcgtatgtcgtcttgttgtactctttttcttc
ctctggtggcgtattgcgaaccctaacgaggatgcaatgtggctatggggactatctata
gtgtgcgagctttggttcgctttctcttggattcttgacattcttccgaagctaaaccct
ataaacagagcaaccgatctcgatgccttgcatgacaagtttgagcagccttctccttca
aaccctactggtcgctctgatcttcccggtgttgatgtgtttgtttccactgctgacccg
gagaaagagcctcctttagttaccgcgaacacccttctttcgatcctcgctgtggattac
ccaatcgagaagctttcagcttacatttcagacgatggtggtgccattctcacctttgaa
gccatggctgaagctgttcgctttgctgagtattgggtgccattttgtagaaaacatgac
atagagccaaggaaccctgatagttacttcaacctcaagaaagacccgacaaagaacaag
aaaaagccagattttgtgaaagatcgtcgttgggtcaagcgtgagtatgatgagttcaag
gttaggatcaatggtcttccggaacaaatcaagaaaagagctgagcagttcaacatgagg
gaacagctcaaggagaggcgtattgccaaagaaaaaaatggcggtgtactaccacctgat
ggagttgaggttgtaaaagcaacgtggatggctgatggtacgcattggccagggacgtgg
tttgaacctaaacctgatcattcaaaaggagaccacgccggaatcctacagattatgagt
aaagtgcctgagcttgaaccggtgatgggaggaccgaatgaaggtgcgctggactttaca
gggattgatatccgagtaccgatgtttgcgtatgtgtcacgtgagaaacgtccaggtttt
gaccataacaagaaagctggtgccatgaacggtatggttagagcttcagctattctatca
aatggtgcattcatcctcaatttggattgtgatcattacatctacaactctaaagctatc
aaagaaggaatgtgtttcatgatggaccgagggggtgatcgaatctgttacattcagttt
ccacaaaggttcgaaggaattgacccatctgatcgatatgcaaatcacaatactgtcttc
tttgacggtaacatgagagcattagatgggttacaaggtccggtctatgtcggaacaggg
tgtatgttccgaaggtatgctctctatggatttaacccacctcgagctaatgagtactca
ggtgtgtttggtcaagagaaagccccggctatgtatgcccggactcagtccggcgcgtct
caaaattctcaaaattctcaaacatctgatatagagtcagatacacaacctcttaccgat
gatccggatcttggtctgcctaaaaagtttggtaactcaaccgtgttcacagacactatt
ccagttgcagagtaccaaggacggcctctagcagatcacatgtcagttaaaaacggtcga
ccacccggtgctttgctcctgcctcgacctccccttgatgctccaaccgtagctgaagcc
atcgctgtcatttcctgctggtatgaagacaatacagaatggggagatagaatcggatgg
atttacggttcggtcacagaagacgtggtgaccggctaccgtatgcataaccgtggttgg
cggtccgtttactgcatcacaaaacgtgacgcattccgcggcacagcaccgataaatctc
accgaccgtctccaccaagtcctccgttgggccactggctcagtagagatcttcttctcc
aagaacaacgcgattttcgccaccagacggctcaagtttctccagcgagtcgcctacctc
aacgtcggtatctaccctttcacctccatcttcctggtcgtctactgcttccttccagct
ctctgtctcttctccggcaaattcatcgtccagagccttgacattcatttcctctcatac
ctcctctgcatcaccattaccttaactctaatctccctccttgaggtcaaatggtcaggc
atcggactagaagaatggtggaggaacgaacagttttggcttataggaggcactagtgct
catctagcagcagttgtccaaggattcctcaaagtgatagctggaatcgaaatctccttc
acattgacatctaaggctgcaggagaagatgaagacgacgcctttgccgatctttacatc
gtgaagtggacggggctgttcatcatgcctctaacgatcattgtagtgaacctcgtagcg
attgtgataggagcttcgaggacgatatatagtgtgattccgcagtggaacaagttgcta
ggagggatgttctttagcatgtgggttttgactcatatgtatccgtttgctaaagggctg
atgggtcggagaggaaaggttccgaccattgtttatgtttggtcagggcttgtctcgatt
actgtatcgctgctttggatcacgattagtcctccagatgatgctacaggcggtggagga
atatcagtgtaa
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