Raphanus sativus (radish): 108852970
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Entry
108852970 CDS
T06014
Name
(RefSeq) nibrin homolog
KO
K10867
nibrin
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108852970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108852970
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108852970
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
108852970
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
108852970
BRCA1-C complex
108852970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
108852970
NCBI-ProteinID:
XP_018481941
UniProt:
A0A6J0NCR5
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All DBs
Position
4:46107871..46110993
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AA seq
535 aa
AA seq
DB search
MVWGLFPVDPLSGEDKYYIFSEGTYKIGRKGCDIIINKDKGVSRIHAELTFDATTSLRRN
KSPPDTSSFVIRVKDCSKYGTFIKTDLGTKDKVHELPNKERILNDGDVITFGTGAATYRL
SLIPLVFYFCPSSDTFKVDRSVQETVSSIGARTTHILSEECTHVLVEPRMQVNEALLNAV
LAKKPIILTNWVTLLAEKSIRSEFPGNSQYRPSVMVEEALVDVMEPNIREKCLQGFAFVL
EPTDTYRFGSSFSSLLRVCGAETVAIAEISSMSQDSQYGETNRIICVIPISSGDKFGRLK
NLSLLSRVNEMDLISAILSGNLPSTSLIPPSVVISSSCSTDETVVADSDVEEEEETTSSV
HMVDATEKAETPEKPAAAVVVIEESPVTTIVEETVNLNEFKSVNLTADTEMKDYSDVTMR
RDGNDEPECGKSEVIYTQHLIVRSTRNVRSTGVEGVVDFKRFRKGNANIISGNSFSSLIP
FAKDPYKECDTGEVTDFMKEEKKRKQREAVAEDLFHNEKARKRGTAGSIRGFLRG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggtctctttcccgttgatcctctctcaggtgaagataaatactatatattt
tcagaagggacttacaagattggtcgaaaaggatgcgacataattatcaataaggataag
ggagtgtctaggatccacgccgagttaactttcgatgcaacaacctctcttcgcaggaat
aaatctcctcctgatacctcctcgtttgttatacgtgtcaaagattgttcaaagtatggc
acctttatcaaaactgacctcgggacaaaagacaaagttcatgagctacctaataaggag
agaattctcaatgatggagatgttatcacctttggtactggtgcagctacttacaggttg
tctttgattccgctggtgttttacttctgcccttcctctgatacctttaaggtggatcgg
tcggtacaagagactgtttcatcaattggtgctcgtactactcatatcttgagtgaggag
tgcacacatgttcttgttgagccgcgtatgcaagtgaatgaagctctgctcaatgcagtt
ttagccaaaaaacccatcattttgacgaactgggttacgcttcttgcagagaaaagtatc
cgcagcgaatttcctggaaacagccagtacagaccatcagtgatggtggaagaagctttg
gtggatgtaatggaaccaaacatccgtgaaaaatgtctacaaggatttgcctttgtgttg
gaaccaacagacacttacagatttggtagcagcttctcatctttactcagagtatgtggc
gcagagactgttgccatagcagagatcagctccatgagtcaggattctcagtatggagaa
actaaccggattatatgtgtcatcccaataagctcaggagacaagtttggccgtttgaag
aatctcagtctgttatctagagtgaacgagatggacttaataagcgctatcttgtctgga
aatctgccttcgacttcgttgataccaccttctgttgtgatttcatcatcgtgctccacg
gatgagacagtggtagcagactctgatgtcgaagaggaggaagaaacaacatcgtcagtt
catatggtcgatgccacagagaaggcagaaacaccggagaagcctgctgctgctgttgtt
gtgatagaagagagtcctgttactactatagtggaagaaactgtgaacttgaacgagttt
aaaagcgttaacttaacggcagataccgaaatgaaagactacagtgacgttacaatgaga
agggatggtaatgatgagcctgaatgtgggaagtcggaggttatctacactcaacatctt
attgttaggtcaactagaaatgttcggtctacaggtgtggaaggagttgttgacttcaag
cgattcagaaaggggaatgctaatattatatccggaaacagcttcagtagtctaatacct
ttcgccaaggatccatacaaagagtgcgatacaggtgaagtgacagactttatgaaagaa
gagaagaagaggaagcagagggaagccgttgcagaggacttgtttcacaatgaaaaggct
agaaagcgtggaacggctggttccatccgcgggtttctcagaggttga
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