Raphanus sativus (radish): 108853494
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Entry
108853494 CDS
T06014
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108853494
03012 Translation factors [BR:
rsz03012
]
108853494
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108853494
mRNA cycle factors
Stress granule specific factors
108853494
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
eIF-4
108853494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
108853494
NCBI-ProteinID:
XP_018482407
UniProt:
A0A6J0NCD9
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All DBs
Position
4:complement(51550598..51556779)
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AA seq
1621 aa
AA seq
DB search
MSYNQPRPDTQQYRRTGRSTGYHQQQQQQQPHRSSTAGYGRGAGGGPPPASSAAVDPSNR
SFKKPGNNAQGGHHQQQQPRVNLPPVNSNHNGPNVQSRSQGEPVVGGPVANSTSGAAIPK
APTSQSPAAMNSKTNESQNTAKGAVPGDPSKAFAFQFGSLGPDLMKIPARTSSAPPNMDE
QKRAQLQQASLKPAPNVPAPVPKKDSPNKAADVQVHHMSPLNQTQKSPITHIRMPSVQTP
YQHPQVPHPVHFGPPPNMHMQPPNVAPTSFQMPMPMGLPMGNTPQIQPQVFFQGLPSHPM
HHQGMMHQAPQGHGFATPMGAQIHPQMGHVGVGLTPQYPQQQGGKYGGGRKTTPVKITHP
DTHEELRLGGRGELHQDGQPQGPKSHPNTPPRSHPVSTFASRPLHVVQTSFNSSPITYTP
RPLHVVQTAFNSGPVIDGSQRVQFTNHSTHTAPQPFKPASEAHVSSDSSSTKAHVTSSAL
PAPGRVTVKQAPTPEKAESPKTRPHEETNVGLSQKKVETGSLDSSQQPKPGSVSALSNLT
APSAKAPVETVTVATTTIGSVQKVNESSSVEDQTRTCKVEPSHNATEVHGQTPVSDLETK
ATVAKENSSLPATNGFEKQNVPASASPDTRIDKTAEDLNCDEGTISGKEVDESVNSDEKL
ETVSGVLEKAQNEVDGATDICSDSEKSSKVADDTSSELQHSPHSQSSTVPVEHSSNSLTS
TTATLSKDRTAFESNTKRPTSTKGKKKIKEILQKADAAGTTDLYNAYKGPEEKKEIAMPL
ESSDVSNQKLQDVVEATVDTEPVKNEPENWEDAADVSTPKLESVQGKPGSADEVRDSCSN
MEKKYSRDFLLKFADMVTALPEGFDISSDVASSVIGPPHHEHGKVMDRQGSSSGRRPSNM
SDDRWAKNQGSLPSGQHGGNVGFRSGQGGNSGVLRNPRMQQGPIMSRPMQPVGPMVGMGR
NDMWQRGSNFQQKGLFPSPHTPMQVMHRAERKYQVGTVTDEEQAKQRQLKGILNKLTPQN
FEKLFEQVKGVNIDNVVTLTGVISQIFDKALMEPTFCEMYADFCVHLSGALPELNEDGEK
VTFKRLLLNKCQEEFERGEKEEEEASRVAEEGSVEQTEEEMEETRLKVRRRMLGNIRLIG
ELYKKRMLTEKIMHACIQKLLGYDQDPHEENIEALCKLMSTIGVMIDHSKAKVHIDAYFD
RMKMLSGKEEYSSRVRFMLINAIDLRKNKWQERMKVEGPKKIEEVHRDAAQERQTQAKRL
SRGPSMNVSGRRSHMEYSPRGGGGGMLSPPSAQMGGYHGPSQGRSYNNNQDIRFDERPAY
EPRMVPMSQRSVGEEPITLGPQGGLGQGMSFRKPAVGSNSDPRRPAGGLNGVGSQRPASP
VTQGRSSPQERGSAYVHREFASLSRASEPSSEVPSARQVPQGPSAAVNIPQERLQDMSLS
AIKEYYSARDEKEIGLCMKDINSPAFHPTMISLWVTDSFERKDKERDLLAKLLVNLVKSA
DNDLTGAELVKGFETVLTTLEDAVNDAPKAAEFLGKIFGKSVTENVVTLAQIGRLIREGG
EEPGSLMEFGLGGDVLGSVLETIKSEAGEEAFVEIQRSSGLRIEDFKPPAPNRSKILDKF
T
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaatcaaccacggcccgatactcaacagtatcggcgaaccgggcgatctacc
ggctatcaccaacaacaacaacagcaacaaccgcaccgatcttccaccgccggttacggt
aggggagccggcggtggacctcctcccgcctcttccgccgccgtcgatccctctaatcgc
agttttaagaagcctggcaataatgctcaaggagggcatcatcagcagcagcagcctagg
gtgaatctgcctcctgtgaatagcaatcacaatggtcctaatgtacaatctcgctctcaa
ggagagccggttgttggtggaccggtcgcgaattcaacgagtggagctgctattccaaag
gctccaacttcgcagtctcctgctgctatgaattctaagaccaatgagtctcagaacaca
gctaaaggagcagtccctggagacccttctaaagcatttgctttccagttcgggtcactt
ggtcctgatttgatgaagattcctgctcgaactagctcagcacctcctaacatggatgag
cagaaacgtgcacagctgcagcaagcttctttaaaaccagcaccgaacgttccagctcct
gtacctaaaaaagactcaccaaataaggctgcagatgtgcaagtccatcatatgtctcct
ctaaaccaaacgcaaaagtctccaattacgcatatccggatgccttctgtccagacacct
tatcagcatccgcaggttcctcaccctgtgcatttcggtcccccgccgaatatgcacatg
cagcctcccaatgtggctcccacctcatttcagatgccaatgcctatgggattacctatg
ggaaatacacctcagatccagccgcaagtgttttttcaaggtctcccttcacaccccatg
caccatcagggtatgatgcatcaggcgccgcagggacatggctttgctactccaatgggt
gctcagattcatcctcagatgggccacgtgggtgtgggtttgacccctcaatatccccag
cagcaaggaggcaaatatggtgggggacgtaagacaacacccgtcaagattacacatccg
gacacgcatgaagagctgagacttggtggacggggtgagcttcatcaagatggccaacca
caaggtccaaaatcgcatcctaacacacctcctagatcacatccagtgtcaacatttgct
tcacgaccacttcatgtggttcaaacctcttttaactccagtccaataacatatactcca
cgaccacttcatgtggttcaaaccgcttttaactccggtccagttattgatgggtctcag
agggtacagtttaccaaccattccactcatactgctccacagcctttcaaacctgcatct
gaggcacatgtttcatctgattcttcatctacgaaagcacatgtgacgtcatctgctctg
cctgcacctgggagggtaacagtgaagcaagctcctactcctgaaaaggctgaatcacct
aaaaccaggccacatgaagaaactaacgttggtctgtcacaaaagaaggtggagactggt
tcattggactcttcacagcagccgaaacctggctctgtctctgcgttatcaaatttgact
gctccgtcagcaaaggcacctgtggagacggttacagttgcaacaactacgattggaagt
gtgcaaaaggtgaatgagtcgagttcagtggaagatcaaacacggacgtgtaaggtggaa
ccctctcataatgcaactgaggttcatggacagactccggtatctgatctcgaaacaaaa
gccactgttgctaaggaaaattcatcacttccagctaccaatgggtttgagaagcaaaac
gttccagcttctgcctcgccagatacaagaattgacaaaactgcggaagacctaaactgt
gatgagggaactatttcaggaaaggaggttgatgagtctgtaaattctgatgagaagctc
gaaacagtatcaggcgtgcttgagaaggcacagaatgaggtggatggtgccacagacatt
tgttccgactcggagaaatcatctaaagttgcagatgatacaagctctgagcttcaacat
tcccctcattctcagtcatctacggttcctgttgaacattctagtaacagtttgacatct
accacagctactctttctaaggatagaactgcttttgaatcgaacacaaaaagacctact
tctaccaaaggaaagaagaaaataaaagaaattcttcagaaggcagatgctgcagggaca
actgatctctataatgcttataaagggcctgaggagaagaaagagattgcaatgcctttg
gagagctctgatgtttcaaaccagaagctgcaggatgttgttgaagccactgtggatact
gaaccagtgaaaaatgaaccggaaaactgggaagatgcagctgatgtttccacaccaaag
ctggaaagtgtgcagggaaagccaggttccgcagatgaggtcagagacagctgcagtaat
atggaaaagaaatactcccgggatttcctccttaagtttgcagacatggttactgctctt
cctgagggctttgacatttcgtctgatgttgctagctccgtaatcggtccgcctcatcat
gaacacggaaaggttatggatcggcaaggtagtagtagtggtcgacgtcccagcaatatg
tctgatgataggtgggcaaagaatcagggttctcttccctcaggacaacatggaggtaac
gttggtttccgaagtggtcaaggaggaaactcaggagtcctaagaaaccctcgtatgcag
cagggcccgataatgtctagaccaatgcaacctgtgggtccgatggtaggaatgggcaga
aacgacatgtggcaacgaggttcaaatttccaacagaaaggactttttccttctccgcat
actcctatgcaggtgatgcacagagctgagagaaaataccaagttggtactgttacagat
gaagaacaggcaaagcaaaggcagttgaagggtatcttgaacaagctgactccacagaac
tttgagaagctgtttgagcaagttaaaggtgtcaatattgacaacgttgttacgcttacg
ggtgtcatctcacagatatttgacaaagctttgatggagcctaccttctgtgagatgtat
gctgatttctgtgtacatttgtctggtgcgttacctgaattaaatgaggacggtgagaag
gtcaccttcaaaagattgctactcaataagtgtcaggaggaatttgagagaggagagaaa
gaggaggaagaagcaagtagagttgctgaagaaggaagtgtagaacaaactgaagaggaa
atggaagagacgagactcaaagttcgtaggagaatgctgggtaatattagactcattggt
gagctatacaagaaaaggatgttgactgagaagatcatgcacgcatgcatccaaaaattg
ctcgggtatgatcaggatccacatgaagagaacattgaagctctgtgtaaactgatgagt
acgataggagttatgatcgatcatagcaaagctaaggttcacatagatgcatattttgat
agaatgaagatgctatcaggcaaagaagaatattcttctagggtgaggttcatgttgatt
aatgccatagatctgagaaagaacaaatggcaggagcgaatgaaggttgaagggccaaag
aaaatagaggaagtgcacagagatgctgcacaagaacgccaaactcaagctaagaggcta
tcgcgtggaccctcaatgaatgtgtcaggaagaagaagtcatatggagtatagtcctagg
ggaggaggaggaggaatgctgtcacctccgagtgcccaaatgggtggttatcatggacca
tcccaaggtcgtagttataataataaccaggacattagatttgatgaaaggccagcctat
gagcctaggatggttccaatgtctcaaaggtcagtaggtgaggagcctattaccttgggt
cctcaaggtggtcttggtcaaggaatgtcgtttagaaagcctgcagtagggtcaaattct
gatcctaggcgaccagctggaggtttgaatggtgttggctcacaaagacctgcaagtcct
gttactcagggacggtcaagtcctcaagagcggggatcagcttatgttcacagggagttc
gcaagtctgtctcgtgcttctgaaccgtcatcagaagtgccatctgctaggcaagtaccg
caaggaccatcggcagcagtgaacatccctcaggaacggttacaagatatgtccttatct
gccattaaggaatattacagtgcccgagatgagaaggagattggtttatgcatgaaagat
ataaattcaccagctttccacccaacaatgatttctctgtgggttactgattcttttgag
agaaaagacaaagaaagagatctcttagcaaagctccttgttaaccttgtgaaatctgct
gacaacgacttaaccggagccgaactagtgaaagggtttgaaaccgttttgactacactg
gaggatgctgtgaatgatgctccaaaagcagcagagtttctaggcaaaatcttcggtaaa
agtgtgactgagaatgtagtgacattggcacagattggtcggctaatacgtgaaggagga
gaagaaccaggaagtctgatggagtttgggttaggaggtgatgttcttgggagtgttttg
gagacaataaagtcagaagcaggagaagaagcttttgttgagattcaaaggagctcaggt
ctgaggattgaagatttcaaacctcctgcacctaacaggtctaagatattagataaattt
acttag
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integrated database retrieval system
