Raphanus sativus (radish): 108853564
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Entry
108853564 CDS
T06014
Name
(RefSeq) plant-specific TFIIB-related protein 2-like
KO
K03124
transcription initiation factor TFIIB
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108853564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108853564
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
108853564
Prokaryotic type
Archaeal type
TFB
108853564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
VMAP-M20
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
108853564
NCBI-ProteinID:
XP_018458465
UniProt:
A0A6J0LE55
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All DBs
Position
4:12367252..12368483
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AA seq
337 aa
AA seq
DB search
METCFECKKPTETVIDKCTGDTICTECSLVISHHYIDDSQEWRTFVNDDNSDRDPNRVGG
PTNLLLKSGGIGTSIDKGRGNTSSVSKNNLYELFRAQNHVKNSEDELIEKACKEIKRISE
DLGLISGVEFRACEIVSKLDGGDSSKRLRREKHMNALCAAAVSTACRELKLSRTLKEISV
VAGGVDLKDINKASRTIRRLVGSDQDEVDTSTAASQVIIKTGELVSRFCSKLDISVRETK
AIREAVENADNFDIRRNPKSILAAVILMVCQLSQTKGRSIREIAVAAEVAENTIKNAVND
IYPYASKIIPPWYASEEDIIERFGGTIGSWDAEKHTA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgctttgagtgcaagaaacctactgaaacggtgattgacaaatgcaccggc
gatacaatttgcacagagtgcagcctcgtcatttcccatcactacatagacgacagccag
gaatggagaacattcgtcaacgacgataacagtgacagagaccctaatcgtgtcggtggt
ccaaccaatcttcttctcaaatccggaggtatcggcaccagcatcgacaaaggcagagga
aacacttcctccgtctccaagaacaacttatacgaactcttccgggcacagaatcacgtc
aagaactctgaagacgaactgatcgagaaagcgtgcaaagaaatcaaaaggatatcagaa
gatcttggtctaataagcggtgtcgagtttagggcttgcgagatcgtgtcgaaactcgat
ggtggtgacagcagcaagagattacgcagagagaaacacatgaacgctctctgtgcggca
gctgtttcaacggcttgtcgtgagctgaaactctcgaggacgttgaaagagatctccgtg
gtggctggtggtgtggacttgaaggatataaacaaagcgagtaggacgataaggcgtctt
gttggttcagatcaagacgaggtggatacttctactgctgcttctcaggtgattatcaag
acaggagaacttgttagccggttctgttccaaactcgacataagtgtaagagagacaaag
gctattcgagaagcggttgaaaacgctgacaatttcgatatccgaagaaaccctaagtcg
attcttgctgctgttatcctcatggtttgtcagctatcacagaccaaagggagatctatt
cgagaaattgcggtggctgctgaagtggcggagaataccatcaagaacgccgttaatgat
atatacccttacgcctcgaagattataccaccgtggtatgcttctgaagaggacatcatc
gagaggtttggaggtaccataggttcttgggatgctgaaaaacataccgcatag
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