Raphanus sativus (radish): 108853607
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Entry
108853607 CDS
T06014
Name
(RefSeq) eukaryotic initiation factor 4A-1-like
KO
K03257
translation initiation factor 4A
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108853607
03012 Translation factors [BR:
rsz03012
]
108853607
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108853607
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108853607
mRNA cycle factors
Stress granule specific factors
108853607
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
eIF-4
108853607
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108853607
Exosomal proteins of bladder cancer cells
108853607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Ubiquitin_TPR1
AAA_22
CMS1
LPD39
Motif
Other DBs
NCBI-GeneID:
108853607
NCBI-ProteinID:
XP_018482522
UniProt:
A0A6J0NCQ2
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All DBs
Position
1:25631342..25633774
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AA seq
412 aa
AA seq
DB search
MAGSAPEGKQFDTRQFDQRLNEVLEGQNEFFTSYDEVHESFDAMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCNGLDVIQQAQSGTGKTATFCSGVLQQLDITLVQCQALVLAPTRELA
QQIEKVMRALGDYLGVKVHVCVGGTSVRDDQRILQAGVHVVVGTPGRVFDMLRREYLPSD
CIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITKKFMSKPVRI
LVQRDELTLEGIKQFYVNVEKEDWKLETLCDLYETVPITQSVIFVNTRRKVDWLTDQMRS
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSIVINYDLPTQPE
NYLHRIGRSGRFGRKGMAINFVTRDDERMLTDIQNFYNVVVAELPSKIADLL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatcggcaccagaaggtaaacagtttgatacgcgtcagtttgaccaaaggctc
aatgaagtcctggagggacagaatgagttcttcacctcgtatgatgaggttcatgagagt
tttgatgccatgggtttgcaagagaaccttcttaggggtatctatgcttatggttttgaa
aagccttcggctattcagcaaagaggaatcgtacccttttgcaacggtcttgatgtgatc
cagcaggcacagtccggtactggaaaaaccgccacgttctgctctggtgtcttgcagcag
cttgacatcacccttgtccagtgccaagctctagtcctggctcccaccagagagcttgct
cagcagattgaaaaggtcatgcgtgctctaggagattaccttggggtcaaggttcatgtc
tgtgttggtggaaccagtgttcgtgacgatcagcgtattctccaagctggtgtccatgtt
gttgttggaacgcccggtcgtgtctttgacatgctcagaagggaatatcttccctctgac
tgcatcaagatgtttgttcttgatgaagctgatgaaatgctctcccgtggtttcaaggat
cagatatatgacatattccagcttctcccaccaaagattcaggtaggagtgttctcagct
acaatgccaccggaagctctcgagatcacaaagaagttcatgagcaaaccagtgagaatc
ttggtgcaacgtgacgaactaacacttgaaggtatcaagcagttctacgtgaacgtggag
aaagaagactggaagctcgaaactctctgtgacctctacgagaccgtacccatcactcag
agtgtcatcttcgtcaacacacgtcgcaaggtggactggctaacagaccaaatgagaagc
cgtgaccacacggtctcggccactcacggagacatggaccaaaacacgagggacattatc
atgagagagttcaggtctggttcttctcgtgttctcatcacaactgatctcttggctcgt
ggtatcgatgtgcagcaagtgtctattgtcatcaactatgacctcccaactcagcctgag
aactaccttcaccgtattggaagaagtggaaggtttgggaggaaaggtatggcgattaac
tttgtgactcgtgatgatgagagaatgcttactgatattcagaacttctacaatgttgtt
gttgcggagcttccatcaaaaatcgccgacctgctttga
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