Raphanus sativus (radish): 108853816
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Entry
108853816 CDS
T06014
Name
(RefSeq) ABC transporter G family member 42-like isoform X2
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108853816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108853816
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108853816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC2_membrane_3
AAA_29
AAA_28
AAA_16
AAA
Rad17
RsgA_GTPase
ABC_trans_N
AAA_25
SMC_N
RuvB_N
AAA_11
Motif
Other DBs
NCBI-GeneID:
108853816
NCBI-ProteinID:
XP_018482761
UniProt:
A0A6J0NF46
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All DBs
Position
4:8038227..8044832
Genome browser
AA seq
1388 aa
AA seq
DB search
MTTPQIAGDENGNVGDEEVRSQWAAIERLPTFERITTALFWNRDEQGRRNERRVRDVSKL
EDLDRHLFIDDLIKHVEDDNLQLLQKVKNRIDEVGLELPTIEVRFSDLFVEAECEVVYGK
PIPTLWNAIASRLSRVMCLKKEKNISILNGVSGIVRPKRMTLLLGPPSCGKTTLLLALAG
RLDPSLKTTGNVSYNGHLLSEFVPEKTSNYVSQNDLHIPEITVRETLDFSGCFQGTGSRL
ETVKEISRREKLKGIVPDPDIDAYMKAASIEGSKTNLQTDYILKILGLSFCADTRVGDTS
RPGISGGQKRRLTTGETIVGPIKTLFMDEISNGLDSSTTFQIVSCLQHYALLSEGTIVVS
LLQPAPETFEIFDDVILMGEGKIIYIGPRDYICTFFEDCGFKCPTRKSVAEFLQEVISRK
DQEQYWCHIDKPYCYVSIDSFIERFKKSELALQQQEELSKTHDKSQAQKEALCSRKYSLS
NWEMLRACSRREFLLIKRNSFVYVFKSGLLICIGSIAMTVYLRTGSKRDVVHANYLMGSL
FFSIFKMLADGLPELTLTISRLSVFYKQKELYFYPAWAYAVPSAILKIPISFLEAFMWTS
LTYYVIGYSPDIGRFFRQFLIFFALHLSCISMFRAIAATFRDFVLATTIGTVSVVLLSLF
GGFVLRKPSMPAWLQWGFWLSPLSYAEIGLTSNEFFSTRWSQTTSGNRTLGEEVLDARGL
NFGDQSYWSAFAALIGLAFFFNIIFVLALTFLKASNRSRAIVSGDDNSQSSGNHNKSSSK
VASQSKNALPFKPLTFTFQDVCYFVQTPQGKKVQLLSNVTGAFKPGVLTALMGVSGAGKT
TLMDVLSGRKSRGDIEGEIQVGGYRKVQETFARVSGYCEQFDIHSPNLTIEESLEYSAWL
RLPSTINSETKRAIVREVLETIELEGIKDSIVGLPGVSGLTTEQRKRLTIAVELVANPSI
IFMDEPTTGLDARAAAIVMRAVKNITETGRTVVCTIHQPGTDIFEAFDELVLMKNGGRII
YHGPLGQHSSNVIEYFMRIPGVPEMKENTNPATWLLDITSRSSEDKLGVDLAQIYKESSL
FKENNIVIEQMRGTSSETEELTSSTRYAQTGWEQFKACLWKQQLSYWRNPSYNLTRILFM
CFTSVICGVLFWQKAKKIDTQQDLFNVLGSMYTVVLFTGMNNCSTVLFCIATERNVFYRE
RFSQMYNSWAYSLAQVLVEIPYSLVQSILCVIILYPMVGYYFSVYKVFWSFYAVFCTLLI
YNYFGMLLVVITPNIHVAFTLRSAFYSMVNLFAGYVIPKPSIPKWWIWMYYLSPTSWVLN
GLLTSQYGDMENEVIAFGERKKVSDFVEEYFGFRYDSLALVAIVLIAFPILLASLFAFFI
GKLNFQKK
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcctcaaatagctggagatgagaatggtaacgttggtgatgaggaggttcgc
tctcaatgggctgctattgagagattaccaacgtttgaaaggatcactactgctctgttc
tggaacagagatgaacaagggaggagaaacgagagacgagtcagggatgtttctaaactt
gaagatcttgatagacatctctttattgatgatctcattaaacatgttgaggatgataat
ctccagttattgcagaaagttaagaacagaatcgatgaggttggtctcgagttaccgacg
attgaagtgaggttcagtgatctttttgtggaagcagagtgtgaggtagtttatggaaag
cccatcccaactctttggaatgctattgcaagcagactatctagagtcatgtgtttaaag
aaagaaaaaaacataagcatcttgaatggcgtcagtggtatcgtaaggcctaaaagaatg
actttgttgcttggtcctcctagttgtggtaaaaccactctgctacttgcactagctgga
agactcgacccttctttgaagactacaggaaacgttagttacaacggtcacttattatca
gagtttgttcctgaaaaaacatcaaattatgtaagtcaaaatgatctacacattccagag
attactgtaagagagacactcgatttttcaggatgttttcaaggcacaggaagccgttta
gaaactgtgaaagagattagtagaagggagaaactgaaaggaatagttcctgatcctgat
atagatgcatacatgaaggcagcttcaattgaaggttcaaagactaatctgcaaactgat
tatatcctaaagatcctaggactcagtttctgtgcagatacacgcgttggagatacttca
agaccaggaatatctggtggccaaaagagaagattaactacaggtgagacgatcgtaggt
ccaatcaaaactctgttcatggatgaaatatctaatggtctggacagttcaacaacgttc
cagattgtatcttgtctccaacattatgcccttctgtctgaaggaaccatagtggtttca
ctgcttcagcctgcaccagaaacatttgagatttttgacgatgtgattcttatgggagaa
ggaaagataatctacattggtccaagggattatatttgtacattctttgaggattgtgga
tttaaatgtccaactagaaaatctgttgctgaatttcttcaggaggttatctcaaggaaa
gatcaagaacagtattggtgtcacatagacaaaccttattgttatgtctccattgactca
tttatagagaggttcaaaaagtctgagcttgcgttacaacaacaagaagaactctccaag
acacatgacaagtctcaggctcagaaagaggctttatgctcaagaaaatactcacttagt
aactgggagatgttaagagcttgctcaaggagagagtttcttctgataaaaagaaactct
tttgtttatgttttcaagtctggactcttgatctgcattggatctattgcaatgacggtt
tatctaaggactgggtctaaaagagatgtagtgcatgctaattatcttatgggttctttg
ttcttttcaatctttaaaatgcttgctgatggacttccagaactcacactaacaatttca
aggctctcagtgttctacaagcagaaagagttgtacttttatcctgcttgggcctatgca
gttccttcagctattttaaagatacccatttcatttcttgaagcttttatgtggacgtcg
ttgacatattatgtcattggttatagtcctgatattggcaggttctttcgccagttcttg
atcttctttgctttacacctttcatgtatatcaatgttccgtgctatagccgccaccttt
agagattttgttcttgccacaacaattggaactgtctctgtagtgcttctctcattattc
ggaggattcgtccttcgaaaaccgtccatgcctgcttggcttcagtggggtttctggttg
tctccattgtcatatgctgagattggtctaacctcaaatgaatttttctctacacgatgg
agtcagacaacatctggaaacagaacgttaggggaagaagttcttgatgctcgagggctg
aactttggtgatcaatcttactggagtgcatttgctgctttaattggcttggcattcttc
ttcaatattatttttgtactggctttgacatttctaaaggcatcaaataggtctcgcgcg
attgtgtctggtgatgataacagtcaaagttcaggaaaccacaataagtcaagttctaaa
gttgcttcccaatccaaaaatgcattacctttcaagccccttactttcacatttcaagac
gtttgttatttcgtccaaactcctcagggcaagaaggtgcagcttctctctaacgttaca
ggggcattcaagcctggtgttctcactgctctaatgggtgtgagtggtgctggtaaaacg
actctgatggatgttctctctggaaggaaaagccgcggtgacattgaaggagagatccaa
gtaggtggttaccgtaaggttcaagaaaccttcgcaagggtttcaggttattgtgaacag
tttgatattcactctcccaatttaaccatagaagagtcgttggaatactctgcttggctt
cgacttccttctaccatcaactcagaaacaaagagggcaatagtcagagaagttcttgag
acaatagagctggagggtattaaagattccatagtaggacttcctggagttagcggtttg
acaacagaacaacgcaagagactaacaatagctgtggagcttgttgccaatccttcaatc
atattcatggatgaaccaaccacaggattagatgcaagagctgctgcgattgtgatgaga
gctgtgaagaacatcacagagactggcaggactgttgtttgcaccattcaccaaccggga
actgatatctttgaagcatttgatgagctggttttgatgaaaaatggaggacggattatc
tatcatggacctcttggacaacattcaagcaatgttattgaatactttatgaggattcct
ggagttccggaaatgaaagagaacactaatccagcaacttggttactagacattacatct
agatcatcagaagacaaacttggtgttgacttggcccaaatatacaaggaatcttctttg
tttaaggagaacaatatagtaatagagcaaatgagaggtacatcttcagaaacagaagaa
ctaacctcctcgacgcgttatgctcaaacgggttgggaacagttcaaggcatgcctatgg
aaacaacaactctcttattggagaaacccttcctacaatctcactcgcatcctcttcatg
tgttttacctctgtgatctgtggcgttttgttctggcaaaaggctaagaaaatagacact
caacaagatcttttcaacgtattgggatcaatgtacacggtggttcttttcactggaatg
aacaattgctctacagtgttattctgcattgcaaccgagagaaatgtcttctaccgtgaa
agattttctcaaatgtacaactcatgggcctactcccttgcacaggtgttggttgagatt
ccatactcattagtccagtctattttatgtgtgataatcttatatcctatggttggctat
tacttctcggtgtacaaagtgttttggagcttctacgcagtcttctgcacgttgctcatt
tacaactattttggtatgcttttagtcgtcatcaccccaaacattcacgttgcttttact
ctccgttcggccttctactcaatggtcaatctcttcgctggttatgtcatcccaaaacct
agcattccgaaatggtggatttggatgtattacttgagccccacgtcatgggttttgaat
ggattgctcacgtctcagtatggtgatatggagaatgaggtaatagcgttcggagagagg
aagaaggtttcagatttcgtggaagaatattttggtttcagatatgattctttggctctt
gtagctatcgttctcattgcctttcccattctcttagcatctctttttgcattcttcata
ggtaaactcaatttccaaaagaagtga
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integrated database retrieval system
