Raphanus sativus (radish): 108853903
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Entry
108853903 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI7
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108853903
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108853903
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108853903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
Ariadne
UBA_ARI1
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
108853903
NCBI-ProteinID:
XP_018482882
UniProt:
A0A6J0NDS0
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All DBs
Position
4:37493803..37498304
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AA seq
560 aa
AA seq
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MDSEEDMLDAHDMYSGEDDFYSDDYKDSDGDGDGDDDDDGEPDYGFVEEDADDSAMIASH
RSQKNFSVLREEDILRHQRDAIERVSVVLSITQVEASILLRYFHWSVGKVHDEWFADEER
VRNTVGILERPVVPPSVDTELTCGICFDPYPPEKIASVSCGHPFCTTCWTGYISTTINDG
PGCLMLRCPDPSCLAAVGHDMVDKLASEEDKDKYNRYFLRSYIEDNRKMKWCPAPGCEYA
IDFVAGSGNYDVSCLCSFSFCWNCTEEAHRPVDCSTVSKWILKNSAESENMNWILANSKP
CPRCKRPIEKNQGCMHMTCTPPCKYEFCWLCLGAWMDHGERTGGFYACNRYEVAKQEGQY
DETERRREMAKNSLERYTHYYERWASNQTSRQKAMTDLQQLQTHNLEKLSDKQCTPESQL
KFILEAWLQIIECRRVLKWTYAYGYYLPDHEHAKRQFFEYLQGEAESGLERLHQCVEKDL
LQFLNAEGPSKDFNDFRTKLAGLTSVTKNYFENLVKALENGLADVDSRAACSSKSTSSKS
TGCSSKTRGKGKGSSRSGGS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaagaagacatgctcgatgcgcacgatatgtactcaggtgaggatgatttc
tacagcgatgattacaaggatagcgatggtgatggtgatggtgatgatgatgatgatggg
gaacctgattacggctttgttgaggaagacgctgacgattctgccatgatcgcctctcat
cgctctcagaaaaactttagtgttctgagggaagaagatattctgaggcaccagagggat
gctattgagcgagtttctgtcgtcctctctattactcaagtcgaagccagtattctgctt
cgttacttccactggagtgttggtaaagttcatgatgaatggtttgctgatgaagagaga
gtccggaatactgtgggcatattagagagacctgttgttccaccatctgttgacactgaa
cttacatgtggaatctgtttcgatccttaccctcctgagaagattgcttcggtttcttgt
ggccatcctttctgcactacctgctggacaggttatatcagcacaactattaatgacggc
ccgggatgtttgatgctaagatgtcctgacccatcttgtctagctgctgttggtcatgat
atggttgacaaattagcgtctgaagaagataaggacaagtacaatagatactttcttagg
tcttatattgaagacaacagaaagatgaagtggtgtcctgccccggggtgtgaatatgcg
attgattttgttgccgggtctggaaactatgatgtttcttgcctgtgctcgtttagcttc
tgctggaattgcacagaagaggctcaccgacctgtggattgtagcaccgtttcaaaatgg
atactaaagaacagtgctgaatctgaaaatatgaattggatacttgccaattcaaagcct
tgtcctagatgcaagcggccaattgaaaaaaatcagggctgtatgcatatgacatgcaca
ccgccttgtaaatatgaattttgttggctttgtcttggtgcgtggatggaccatggggaa
agaactggtggtttttatgcttgtaaccggtacgaggtggccaagcaagaagggcagtat
gatgagactgaaaggaggagagagatggccaaaaactcactggagaggtacacacattat
tatgaacgctgggcaagcaatcaaacgtcgaggcaaaaggctatgacggatctgcagcaa
ttgcagacgcataatcttgagaagcttagtgataagcagtgcacaccagaatctcagctc
aaattcatcttagaagcttggcttcagattatcgaatgtaggcgagtcttgaaatggaca
tatgcgtatggatactacctacctgatcatgaacatgctaagcgacaatttttcgagtat
ttgcaaggggaggctgagtcaggtttggagaggcttcatcaatgcgtagagaaggacttg
cttcaatttctcaacgcagaaggcccatcaaaagatttcaatgatttccggacaaaacta
gctggtttgaccagcgtaactaaaaactactttgagaacttggtgaaagctctggagaac
ggtcttgctgatgtagactcacgcgcggcttgcagcagcaaatcaacaagctctaaatca
acaggttgcagtagcaaaacaagagggaaaggcaaaggaagttccagaagtggtggatca
taa
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