Raphanus sativus (radish): 108853954
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Entry
108853954 CDS
T06014
Name
(RefSeq) lariat debranching enzyme isoform X1
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108853954
03009 Ribosome biogenesis [BR:
rsz03009
]
108853954
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108853954
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
RNase
108853954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
108853954
NCBI-ProteinID:
XP_018482931
UniProt:
A0A6J0NFN1
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Position
4:complement(2337932..2340790)
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AA seq
414 aa
AA seq
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MKIAIEGCMHGDLDNVYKTIQHHEQVHNTKVDLLLCCGDFQAVRNEKDMDSLSVPIKYRE
MKSFWKYYSGQEVAPVPTIFIGGNHEASNYLWELYYGGWAATNIYFLGYAGVVKFGNLRI
GGLSGIYKGRDYRLGHFERPPYNNSTIKSVYHVREYDVHKLMQLEEPIDIFLSHDWPVGI
TDYGDSRTLIQQKPYFQEEIEARTLGSKPAAQLLEKLKPRYWFSAHLHCKFAASVQHGND
GSVTKFLALDKCGPGKKFLQIIDIESEPGPFEVLYDEEWLAITRKFNSVFPLTQRPASFS
STDMDMQESREFVRKKLEERQFKPFEFVKTAPAYNPSQRIFDPIPEIPQNPQTLSLLELL
GLPYLLDSSPVTGERTAIPASPARTDFQTYSEEIPIDDLDEVEDIPEAQRDNIQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgctattgaagggtgtatgcatggagaccttgacaatgtgtacaagaccatt
caacatcacgaacaggttcacaacactaaagttgatctcctcctctgctgcggcgatttc
caggctgtgagaaacgagaaagacatggatagcctcagcgtacctataaagtacagagag
atgaagtccttctggaagtactactccggccaagaagttgctcccgttcccactatcttc
atcggtgggaatcacgaggcttccaactacttgtgggaactgtattatggaggttgggct
gccaccaacatctactttctaggttatgcaggggttgtgaagtttggtaatctccgaatt
ggaggcctttctggtatttacaaggggagagattaccgtttaggacattttgagcggccg
ccatataacaatagcacaatcaaatcggtgtatcatgttcgtgagtatgatgtccataag
ctgatgcaactcgaagagccgattgatatattcctctcacacgactggcctgttggaatc
actgattatggagactcaagaacacttattcagcagaaaccatacttccaggaagagatc
gaggcgagaactcttggaagcaaaccagcggctcaactgctagagaaactgaagcctcgg
tattggttttcagctcacttacactgcaaattcgctgcttctgttcaacatggcaacgat
ggctcagtgacaaagtttcttgccttggataaatgcggtccagggaaaaagtttcttcag
atcattgatatagaatcagagcctggaccttttgaagttctatacgatgaagagtggcta
gcaataacacgaaagttcaattctgttttcccgctaacacagagaccagcgagtttcagc
tctactgacatggatatgcaagagagccgagagtttgtgaggaagaagctagaagaaagg
caatttaaacctttcgagtttgtaaagacggcccctgcatataacccttcacagcgtatc
tttgatcccatacctgagatcccgcagaatcctcagacactgtctctgttagagctcctt
ggtcttccatatctccttgattcatcaccagtaacaggtgaaagaaccgccatccctgct
tcaccggctcgaacagattttcaaacttatagtgaagaaatccctattgatgatcttgat
gaagtcgaagatataccagaagcgcaaagagataacatacagtga
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