Raphanus sativus (radish): 108853963
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Entry
108853963 CDS
T06014
Name
(RefSeq) homeobox-leucine zipper protein HDG5 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108853963
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
108853963
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
HALZ
DivIC
Motif
Other DBs
NCBI-GeneID:
108853963
NCBI-ProteinID:
XP_018482944
UniProt:
A0A6J0NFP3
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Position
4:complement(16466828..16471978)
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AA seq
827 aa
AA seq
DB search
MLNMGEENVMTTDHRFASPQPPSSSPATIQSPNFNFNPFNSFPSIIPKEEHGMMSMSMLM
MMGDGGVEEMMENGSAGGSFGSGSEQAEDPKSGNEFDVAELQDEEQPPPAKKKRYHRHTN
RQIEEMEALFKQNPHPDDKQRQRLSHELGLKPRQVKFWFQNRRTQMKAQQDRAENVMLRA
DNDNLKAENSHLQAELRCLSCPSCGGPTVLGDIPFNELHIENCRLREELDRLCSIASRYT
GRPMQSSQPLINPPPEVQHHQPSLELDMSVYTGNFQENPCSDMMLLPPQDTACYLPVQTN
NNSNGYNMLLADEEKVIAMEIAVSCVQELTKMCNTEEPLWIKKKSDKMGGEVLCLNEEEY
RRLFPWPNNKGDFRREASKANAVVIMNSITLVDAFLNADKWSEMFCSVVARAKTVQIISS
GVSGASGSLLLMYAELQVLSPLVPTREAYFLRYVEQNAENGNWAIVDFPIDSFHDQIQPL
SANTLHEYKRKPSGCIIQDMPNGYSQVKWVEHVEVNERHVHEIFSEYVKSGMAFGATRWL
DVLERQCERMASLMARNITDLGVIRSAEGRRNMMRLSQRMLKTFCVNISTSNGQSWTALS
ETTKDTVRITTRKACEPGQPTGVVLAAVSTTWLPFSHVKVFDLLRHQHHHSLLEVLFNGS
SPHEVAHIANGSQPGNCISLLRISVSSNSWHNVELMLQESCIDNSGSLIVYSSVDVDSIQ
HAMNGEDPSGIPLLPLGFSIIPVNYPDQVEGISVNSHPLPSCLLTVGIQVLASNVPTAKP
NLSTVTTINNHLCSIVNQITSVLSSTVAPLIESSSAGDDALANKQGI
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatatgggagaagaaaatgtaatgaccacagaccacagatttgcttcgcctcag
ccgccttcttcttctccggcaacaatccaaagccctaattttaatttcaaccctttcaac
tcatttccctccattattccgaaggaggagcatgggatgatgagcatgagcatgctgatg
atgatgggagatggaggagtagaagaaatgatggaaaacgggtcggccggtgggtcattc
gggtcgggtagtgaacaagcagaagatccaaagtccggaaacgagtttgatgttgctgaa
cttcaagacgaggaacaacctcctcctgctaagaagaaacgttaccacaggcatactaat
cgtcagatcgaagaaatggaagcattgtttaaacaaaacccacatccagacgacaaacaa
aggcagagattaagtcatgaactaggactcaagcctcgacaagtcaagttttggtttcaa
aataggcgtactcaaatgaaggcacaacaagacagagctgagaatgtgatgttaagggca
gacaacgataaccttaaggcagagaattctcatcttcaggcggagctacggtgcctttcg
tgtccttcttgcggtggccccaccgtactcggtgacattcctttcaacgaactccatatt
gagaattgtcgccttcgtgaagagcttgatcgtctatgctccatagcttcaagatacact
ggccgtccgatgcagtcatctcagccgttgatcaatcctcctccagaggttcaacatcac
caaccttcactggagcttgacatgagcgtatacacagggaactttcaagaaaatccttgt
tcagacatgatgttgcttcctccacaagacactgcttgttacctcccagttcaaactaat
aacaacagcaacggctacaacatgttacttgcggatgaagaaaaggttatcgcaatggag
attgctgtctcttgtgtccaagaacttactaaaatgtgtaacacagaagagcctttgtgg
attaagaaaaaatccgacaagatgggtggcgaggtattgtgtctgaacgaggaagagtac
agaaggttgttcccatggccaaacaacaaaggagattttcgtagagaagcctcaaaggca
aacgcagttgtcatcatgaacagcatcacgcttgttgacgcttttcttaacgctgataag
tggtcggagatgttctgctcagttgtggctagggctaaaacggttcagatcatttcatct
ggagtgtctggagctagtggctctcttctgttgatgtatgcagagttacaggtactgtct
ccattggttccaactcgagaagcttattttctacggtatgtagaacaaaacgcggaaaac
gggaactgggcaatcgtagatttccccatcgatagcttccacgaccagatccagccattg
agtgcgaacactcttcatgagtataagagaaaaccttcagggtgcatcattcaagacatg
cctaatggatactcacaagtcaagtgggtcgagcacgtggaagtaaacgagaggcacgtg
cacgagatattctccgagtatgtgaaaagcggaatggcttttggagctacccgttggctc
gacgtgttggagagacaatgcgagaggatggcaagcttaatggctagaaacataactgat
cttggagtgattcgatctgcggaagggaggaggaacatgatgaggttatcacagaggatg
ttgaaaacattctgtgtgaatatcagcacttcgaacggacaatcctggaccgctctgtct
gaaacaaccaaggacactgtgagaatcacgacaaggaaagcgtgtgagcctggtcagcct
acaggagttgttcttgctgctgtctcaaccacttggcttccattctcccacgttaaagtc
tttgatcttctccgtcatcaacatcaccactctctgttggaggttttgttcaatggaagt
tcaccccatgaagtagctcatatcgccaatggttctcaacctggaaactgcatctctctt
cttcgtatcagtgtctcgagcaactcatggcataacgtggagctgatgcttcaagagagc
tgcattgataactcaggcagcttaatcgtctactcctccgtcgacgtggactcaatccag
cacgctatgaacggcgaagatccttccggtattccgcttttgcccctagggttctccatc
atccccgtgaactatcccgatcaagtcgagggtatttccgtcaactcccatcctcttccg
tcgtgtctcctcacagtcgggattcaggtcttggctagcaacgtcccaaccgcgaaacca
aatctctccaccgtcacaaccatcaacaaccatctctgctccatcgtcaatcaaatcact
tctgtccttagcagcactgttgctccgttgatcgaatcttcttcggccggagacgacgcc
cttgccaacaaacaagggatctag
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