Raphanus sativus (radish): 108854015
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Entry
108854015 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108854015
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108854015
Membrane trafficking [BR:
rsz04131
]
Protein recycling
Others
Retriever complex
108854015
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
108854015
NCBI-ProteinID:
XP_056844300
UniProt:
A0A9W3BYJ0
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Position
1:23489186..23495826
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AA seq
906 aa
AA seq
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MEFDFRNRDYGADHESHLLPRSRTQNHPLSSPIASRQQQARTVRGSSDLDFFDPLMGLNA
SAEEKVEEEKDTSLSIEAVTQDLAREWKSLKRILMQHFPVSKVISFSPVSNVITKGSKVE
TPSAQPRLEETGSEQTSLEETAKVMDQQEYLAKVRELIDGITNAWQVEDRVTSLKLSIKV
TKLLMDTTVLQFYPTVFVVVTDMLDMVGDMVWERIKEKAEHDVDGTLICTLSNNFQASDI
CLEARETCYNWFCKVGSVRELLPRIYLELAILPCWRFLVNQPREVLDRLVMMVRGLADPL
ASVYCRLYMVHRMQKLGFCNSGYLIKCIKDIEDILAPILVDKDGCSYITDDKKLLFNLME
PAIEYIMKCLLLTGRQENNVLGMLEELGFGKNKSQSSDNCTHVSILLHHLLKELPSELVS
SQAMEILHMIKCSDDCSFSQVLNYRLLGIRLCEGRSQADFLSALISEVMQAASQYQTLYD
YLRIMDAYVDLLLQNKMENHLDALLDNIVYLARDQFLSEEEQASLQSIILKLLSHFEDLQ
KVLSLNHFIEILDLMSGTSKKIVNMHLLNMGTRNGCICDSTTVQLLFEVSQGLYDATDFV
NIKDDDNRQTSHLISRFVEMVDYGAERERQLLFLAECRGAFSGIHELKETLVRSSNTLAV
KSLKAGKMHINFVKSCLAFSEVTIPSVTIPTKQLNLYLETAEVALLGGLISHSDGLVISA
VECLEDVAPTDGLKSIDVDSMASVVCKLCSLLVMVPGNPEKGVMKILKSIFSATCSSSWA
IPRLKVKILCAIISLLSTLSQDNLPYRSANPEIIGNDILFFGDSSYKNELVSWAQLVVGE
LVEAIEQESSQIARGNIALEACNYISSALIMNEKVSQLCLRLLETAKVCLGEKDRYLEAT
KQSLQL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacttccggaatcgcgactatggagctgaccatgaatctcatctcctccct
cgttctcgaactcagaatcaccctctttcctctccaatcgcttctcgtcaacaacaggcg
agaactgtcagaggtagtagtgatcttgacttctttgatccattaatgggattgaatgct
tcagcagaagagaaggttgaagaagaaaaagatacttctctatccattgaagcggtgact
caggatctggcaagggagtggaagtctcttaaacgaatcttgatgcagcacttccctgtc
tccaaagtcatttctttttctccagtgtctaatgtaataacgaaaggttccaaagttgag
accccttccgctcaaccacgtttggaggagacaggcagtgaacagacttctctggaagaa
actgctaaagtgatggaccaacaggaatatctagccaaagtacgcgagctaattgatgga
ataactaatgcttggcaggttgaagatcgagtaacatcgttaaagttatcgataaaggtc
acaaaacttctgatggacacaacagttctgcagttttatcctacagtctttgttgtagtg
actgacatgcttgatatggttggggatatggtgtgggaacggatcaaggagaaagcagaa
catgatgtagatggaacactgatctgcactttatcgaataattttcaagcaagtgatatc
tgcctcgaagcaagagagacttgctataactggttctgtaaagttggttcagttcgagaa
cttctcccccgcatttacttggagcttgcaattttaccttgctggcgtttcctcgttaat
caacccagagaagttctggatcgtttagtcatgatggtgagaggtcttgcggatccactg
gcatctgtgtattgtcgtctttatatggtgcatcgtatgcagaagttgggtttctgcaat
tcaggatatctaatcaaatgcatcaaggatattgaagacatattagcacctattttagtg
gacaaggacgggtgttcctatattacagacgacaaaaagttgctttttaatttgatggaa
ccagccattgagtatataatgaaatgcctattgctgactggacgtcaggaaaacaatgtg
ttgggcatgcttgaagagcttggatttggaaagaataaatctcagtcgtccgacaactgt
acacacgtgtccattctacttcaccatctactcaaggaacttccatccgaattggttagt
tcacaagctatggagatcctgcatatgattaaatgcagcgacgattgttctttcagtcag
gttttgaattacaggttacttggaatcaggttgtgtgaagggagatctcaagcagatttt
ctcagtgcactcatcagtgaagttatgcaggctgcttctcagtatcaaacgctgtatgac
tacttgagaattatggacgcatatgtggacttgttgttgcagaacaagatggaaaatcat
ctagatgcgctcttggataatattgtatatctagctcgtgaccagtttctttctgaagaa
gaacaagcgagtttgcaatccataattttgaagctgctgtcccatttcgaggacttgcaa
aaagtactttctctgaatcatttcatcgagatcttggatcttatgtctgggacttcaaag
aaaattgttaacatgcatcttctgaacatgggtactaggaatggctgcatatgtgattca
acaaccgtgcaattgctttttgaagtttctcagggtctttatgatgctacagatttcgtt
aacataaaggatgatgataatcgacagacatcacatttaatttctcgttttgttgagatg
gttgattatggggcagaaagagaacgccaattgttgtttttggcggagtgtcgtggcgcc
tttagtgggatacatgaacttaaggagacactagtccgttcaagcaacaccttggcagtg
aaatcactaaaagcaggaaagatgcatatcaacttcgtaaagtcttgcctagcattcagc
gaagttaccattccatctgttacaattccgacaaagcagttaaatctttatctcgaaact
gctgaggttgcgcttttaggtggtttgatttctcattcggatggactggtcatatcagct
gttgagtgtctagaggatgtagcgccaacagatggtttaaagtcaattgatgtggatagt
atggcctcggtggtatgcaaattgtgtagcctcttggtaatggttccaggtaatcctgag
aaaggcgtgatgaagatccttaagagcatcttttctgctacttgctctagttcatgggca
ataccgagattgaaggtaaagatactttgtgctatcatttcactgttgtcgacactttcc
caggataatctgccttaccgttctgccaatccagagataattggaaacgatatattgttc
tttggtgattcatcatacaagaatgaacttgtctcctgggctcagctagttgtaggtgaa
cttgtagaagctattgagcaagaatcttcacagattgctcgagggaacattgcgcttgaa
gcttgcaattacatatcatcagcgctaattatgaatgagaaagtgtcacaactttgctta
agactgctggaaacagcaaaagtttgtttgggtgaaaaggacaggtaccttgaagccact
aagcaatcactccaattatga
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