Raphanus sativus (radish): 108854203
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Entry
108854203 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI11
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108854203
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108854203
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108854203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
Ariadne
UBA_ARI1
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
108854203
NCBI-ProteinID:
XP_018483213
UniProt:
A0A6J0NHB7
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Position
4:37639275..37641407
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AA seq
515 aa
AA seq
DB search
MDYSDDDGMLDNESGEDNLYSDNMADSDSGLLAEEENDKDSTSQLGYVVLKEEDIHEHQR
THIEQVSTLLSINQVEAIALLLHYQWSVSKVEDEWFTDEDKVRKSVGLLKEPVVVAFDLN
DKVNIECGICFDLYLQKEIATVSCGHPYCKTCWTGYITSKINDGPGCLTVQCPEPSCSAV
VGQDMINSLITKEEDKEKFYRYFLRSYVESSRKKVKWCPSPGCEYAVDFGGESENYDVSC
LCSYDFCWNCCEEAHRPVDCGTVAKWIFKNNDESENTTWILANTKPCPNCKRQIEKNQGC
NHMSCSICKHQFCWACLGPWNNHTYCHNFKGDSESEVKRKRAKKAIDRYMHYYERWVSNQ
SSRVMAMADLKKLQSVQLKNMNAKYDIPETQLQFTLEAWLQIIECRRVLKWTYAYGYYLP
EQESTKKRFFEYLQGEAEVGLERLHDCAELEFKQLVKETEDFSKNFENFRWKLIRLTKVT
KTYFENLVKALANGLADVEDNDTKSAKGSKRQKLV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggattattcggatgatgatggcatgcttgataatgaatcaggtgaagataatttatac
agtgacaacatggccgacagtgattctggattattagccgaggaagaaaatgacaaggat
tccacatctcagctaggttacgtagttctcaaggaagaagacattcatgagcatcaaagg
acccatatcgaacaagtttctacgcttctctctataaaccaagtcgaagcgatcgctctg
cttcttcactatcagtggagtgttagtaaagttgaagatgaatggttcacggatgaagac
aaggtccgcaaaagcgtcggtttattgaaggagcctgttgttgttgcttttgatctaaac
gacaaagtgaatattgaatgtgggatttgctttgatttgtatcttcagaaggaaatcgca
acggtttcttgtggtcatccttattgcaagacttgctggaccggttacatcacttcgaaa
atcaacgatggtcctggatgcttaacggttcaatgtcctgagccttcttgttctgctgtg
gttggtcaagatatgatcaatagtcttataacgaaggaagaagataaggaaaagttctac
cggtactttcttaggtcttatgtagaatcgagccgtaaaaaggtcaaatggtgcccttca
ccgggatgcgaatacgctgtagattttggaggtgaaagtgaaaactatgatgtctcttgt
ttgtgttcctatgacttttgctggaactgttgtgaagaagctcaccgccccgtggattgc
ggtacggtggcgaagtggatattcaagaacaatgatgaatccgagaacacgacttggata
cttgccaatacaaagccttgtcctaactgcaaacgtcagatcgagaagaaccagggatgc
aaccatatgagctgctctatttgcaaacatcaattttgttgggcttgtcttggtccatgg
aataatcacacgtattgccacaactttaagggtgatagtgagagtgaagttaagcgaaaa
agggcgaaaaaggcaatcgatagatacatgcattattacgaaagatgggtaagcaatcaa
tcttcgagggtaatggctatggcagatttgaagaaattacaatcggtgcagcttaaaaac
atgaatgccaaatatgacataccggaaactcagctccagttcaccttagaggcatggctt
cagatcatcgaatgcagaagggtcttgaaatggacatatgcatatggatactaccttcct
gagcaggagagtaccaagaaacgatttttcgagtatttacaaggagaagctgaagttggt
ctggagaggctacatgattgtgcagagttggagtttaaacagctcgtcaaggaaactgaa
gatttctctaaaaatttcgaaaatttcaggtggaagttaattcgtttgactaaagtaacc
aaaacctatttcgaaaatcttgtgaaagctttggcgaatggtcttgctgatgtggaagac
aatgacaccaaatcagcaaaagggtctaaaagacaaaagttggtataa
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