Raphanus sativus (radish): 108854205
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Entry
108854205 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase ARI9
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108854205
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108854205
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108854205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
108854205
NCBI-ProteinID:
XP_056864571
UniProt:
A0A9W3DL09
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Position
4:37643800..37645749
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AA seq
472 aa
AA seq
DB search
MDYSDDDCMLDTESGREDNLYSEDGDHGFAEEEMDNDSASHLSYVVLKEEXFTDEERVRK
AVGILKEPVVVDLNHREVANIICGICFESYLQKDIATVSCGHPYCMTCWTGYITAKITGG
PACLAVKCPQPSCSAVVGQDMIDKFISNEEDKEKYYRYFFRSYVEASGKKIKWCPSPGCE
YAVDFGSGSENYDVSCLCSYDFCWNCSEDAHRPVDCQTVSKWIFKNNEESENTNWILANT
KPCPKCKRQIEKNLGCSHMTCVAPCNFEFCWICLRAYPCGGDCNKFKGGDEAENKREMAG
AALDRYMHYYERWASNESSRLTAKRDLEKLQSVQLKQLSDKQKTPETQLQFIVDAWLQII
ECRRVLKWTFAYGYYLPQHEHAKKQFFEYLQGEAQVGLERLHHCAEVEFKQFVSEIQDPS
KDFDFFRRKLTGLTTVTKTYFENLVKALENGLADVEHNESTITTDSMTSTTR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggattattcggatgatgattgcatgctcgatactgaatcaggtcgtgaagataattta
tacagtgaggacggtgatcatggattcgccgaggaagaaatggacaacgattctgcatct
cacctaagttacgttgtgctcaaggaagaatgatttacagatgaagagagagtccgtaaa
gccgtcggtatattgaaggagcctgtcgttgttgatcttaatcacagagaagtcgcgaat
attatatgtggaatttgctttgagtcctatcttcaaaaggacattgcaacggtgtcttgt
ggtcatccttattgcatgacttgttggaccggctacatcactgcaaaaatcacaggtggt
cctgcttgtttggcggttaaatgtcctcagccttcttgttctgccgtggttggccaagat
atgatcgataagttcatatctaatgaagaggataaggagaagtattatagatatttcttt
aggtcttatgttgaagccagcggaaaaaagatcaaatggtgtccatcaccgggatgcgaa
tacgcggttgattttggaagtggaagtgaaaactacgatgtttcttgtttgtgttcttac
gacttttgttggaactgtagcgaagatgctcaccgtcctgtggattgccagacggtgtcg
aaatggatattcaagaacaatgaagaatccgagaacacgaattggatacttgcgaatacg
aagccttgtcccaaatgcaaacgtcagatcgagaagaacctgggatgcagccatatgaca
tgcgtagcgccttgcaattttgagttttgttggatctgtcttcgtgcatatccctgtggt
ggggattgcaacaagtttaagggtggtgatgaggctgaaaacaagagagaaatggcggga
gctgccttggatagatacatgcactattatgaaagatgggcaagcaatgaatcgtcaaga
ctaacggctaagagagatttggagaagttgcaatcggtgcaacttaagcagcttagtgac
aaacagaaaacaccagaaactcagcttcaattcattgtagatgcatggcttcagatcatc
gaatgtaggagggtattgaaatggacatttgcatatggatactaccttcctcaacatgaa
catgccaagaaacaatttttcgagtatttgcaaggggaagctcaagttggtttggagagg
cttcatcattgtgcagaagtggagtttaaacagtttgtcagcgaaatccaagatccgtct
aaagattttgattttttccgcaggaaattgactggtctaactacagtaaccaaaacctac
ttcgaaaatctggtgaaagctttggagaatggtcttgctgatgtagagcacaatgaaagc
acaataacaacagactctatgacttccaccacaagataa
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