Raphanus sativus (radish): 108854239
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Entry
108854239 CDS
T06014
Name
(RefSeq) probable galacturonosyltransferase 3 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00520
Amino sugar and nucleotide sugar metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108854239
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108854239
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108854239
Glycosyltransferases [BR:
rsz01003
]
Polysaccharide
Structural polysaccharide
108854239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
108854239
NCBI-ProteinID:
XP_018483259
UniProt:
A0A6J0NFH6
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MMMMSRCFLWLVLLNHVGGAILESQAPHRELQAYRDCPGCTTTTTSASSVSALHYDPDLK
DVNIVATYSDHHGNIRLGSVKMGHLSSSWLFDNPLRPNTNPSSQLVIPQDSFQNDSTRME
ENAATYSTTNQSGETDNHFPHMEFTSPAKLKRQSLRQERRAQRTLDLIQHDKESDHQMQE
AAIHKSITFENSVVGKYSIWRRDYESPNADAILKLMRDQIIMAKAYSHIAKSKNATNLYL
FLMQQSRENQRVLGKATSDADLPSRALEQAKAMGHALSLAKDELYDCHELAKKFRAMLQS
TERNVDGLKKKGTFLIQLAAKTFPKPLHCLSLQLAADYFLLGFNEEEDGVKKDAKFEDPS
LYHYAIFSDNVLATSVVVNSTVLNAKEPEKHVFHIVTDKLNFAAMKMWFRVNAPTDATIQ
VENINDFKWLNSSYCSVLRQLESARLKEYYFKANHPSSISAGADNLKYRNPKYLSMLNHL
RFYLPEVYPKLDKILFLDDDIVVQKDLAPLWEVDMQGKVNGAVETCKESFHRFDKYLNFS
NPKISENFDAGACGWAFGMNMFDLREWRKRNITGIYHYWQDMNEDRTLWKLGSLPPGLIT
FYNLTYAMERSWHVLGLGYDPALNQTAIENAAVVHYNGNYKPWLGLAFAKYKPYWSKYVE
YDNPYLRLCNINE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgtcgagatgcttcttatggctggtattgctaaatcatgtgggtggagcc
attttagagtcacaagcaccccaccgagaacttcaagcttaccgagattgtcctggatgt
actactactactactagtgcttcctctgtttctgcacttcactacgatccagatctcaaa
gatgtgaacatagttgccacctacagtgaccatcacggtaacatacgccttggtagtgtc
aaaatgggacatctttcatcttcttggcttttcgacaatcctcttcgccccaacaccaat
ccttcttctcagctagtgataccgcaggattcatttcaaaatgattctactagaatggaa
gagaatgctgcaacttattctacaactaatcagtctggtgaaaccgataaccattttcca
cacatggagtttacaagccctgctaaactcaagcgtcagagtttacgtcaggaaaggaga
gctcaacggactctcgacctgatccaacatgataaggaatctgatcaccagatgcaagaa
gctgccattcacaagtctatcacctttgaaaactctgtcgttggcaaatacagtatttgg
aggagagactatgagagccccaacgctgatgctatcttgaagcttatgagagaccagatc
attatggctaaagcatattcccatatcgccaaatccaaaaacgctaccaatctctacctt
ttcttgatgcagcagagtagagaaaatcaacgtgttctgggtaaagcaacatctgatgct
gaccttccttccagagcccttgaacaagcaaaagccatgggccatgctctctctctggca
aaagacgagttatatgactgccatgaacttgctaagaagtttcgggccatgcttcaatcc
actgaacgcaatgtagatggactgaagaaaaagggcaccttcttaattcagctggccgcc
aagacatttcccaagccattgcattgcctcagtctccagcttgcggctgactattttctt
ctcggtttcaatgaagaggaggatggagtcaaaaaggatgccaagtttgaagatccttct
ctctatcactatgccatcttttcggataacgtcctcgcaacatcagtcgtagtcaactcc
actgtcctgaatgcaaaggaaccggagaagcatgtgttccatatagtaacagacaaattg
aactttgctgcaatgaagatgtggtttcgcgtcaatgctcctactgatgccacgattcaa
gttgagaacatcaatgattttaagtggctcaactcctcgtactgctctgttctacggcag
cttgaatccgcaaggctcaaagaatactatttcaaagcaaatcatccttcctctatctct
gctggcgcagacaatctcaagtatcgaaacccaaagtatctatcgatgctgaatcatctg
agattctaccttcctgaggtgtatccgaagctggacaagatcctgtttcttgacgatgac
attgtggtgcaaaaggacctggcacctctatgggaagtagacatgcaaggaaaagtgaat
ggagctgtagagacgtgcaaggagagcttccacagatttgacaagtacctcaacttctct
aatccaaagatctcagagaatttcgatgcgggggcttgcggttgggcatttggcatgaat
atgttcgacctgagagagtggaggaaaaggaacatcacagggatatatcattactggcaa
gacatgaatgaggatagaacgctgtggaagctgggttcgttgccaccggggttaatcaca
ttctacaacctgacatatgcaatggagcggagctggcacgtgctggggctaggctatgac
ccagcgctcaaccagacagctatagagaatgcagcagttgtgcattacaatgggaactac
aagccatggctgggtttggcgtttgccaagtacaaaccttactggtctaagtacgtcgag
tacgataacccttacctccgtctatgcaacataaatgaatga
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