Raphanus sativus (radish): 108854247
Help
Entry
108854247 CDS
T06014
Name
(RefSeq) COP1-interactive protein 1-like isoform X1
Organism
rsz
Raphanus sativus (radish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC39
KIP1
PUMA_CC
Birna_VP5
Rod_CreS
Mod_r
DUF7491
AAA_13
Motif
Other DBs
NCBI-GeneID:
108854247
NCBI-ProteinID:
XP_018483274
UniProt:
A0A6J0NGN4
LinkDB
All DBs
Position
4:31970757..31977903
Genome browser
AA seq
1638 aa
AA seq
DB search
MTKHRFRETLKSFFEPHFDHEKGEMLKGTKSEMDEKVKKILGMVESGDIYEDKSKRQVVS
DLVNEFYSAYQSLYRKYDDLTGDIKKKVHGKGESSSSSSSDSDSDHSSKRKTNRNGKVEK
DVESVTDGQTEAADLKEKLTMSVEEKEAALVKLKESEEIVRNLKLETEKLEGEKTTALSD
SRELHQKLEIAGETETDLSKRLEDMKNERDQLQTEIDNGIKRFQEAEKVAEDWKTTSDQL
KDEVANFKQQLEASEKRVSDMTQGMDSAEEEKRSLSLKVSEISGEIQQAQNTIQELTSEL
GEMKGKYKEKESEHSSLVVLHEIHEKESLSQVKELEARVESSEKMIADLNKNLNNAEEEK
RLLSRRISETSNEIQEAQNTIQELISESEQLKESHSVKDREMFGLRDIHETHQRESSTRT
SELEAQLESSENRISDLNASLKAAEEENKAISSKNVETLDKLEQAQKTIQELMAELGDLK
NRHKEKESELSSLVEVHEALQRDSTSRVKELVAVVESAEQQVADMKQSLDSAEEEKKLLS
QKISEISKEIQEAQNTIQELMSETGKLKDSHGEKEKELSSLRDIHETHQRESSTRVSELE
AQLELSEQRVSDMSVSLKAAEEEKKSMSSKILETTDELKQAQNKIEELMVELGEIKERLK
EKESEHSSLVELHETHVRESSSHAKELEAQIESSEKLVAGLNQSLNNAEEEKKLLSQKIS
EISKEIQQAQNTIQELVSESEQLKESHSVKEREFSGLRDIHETHQRESSTRTSELEAQLK
SSEQRVSELSASLNVAEEESKSMSSKILETTDELKQTQNKVQKLMAELAETKGIHIQKES
ELSSLLEVHEAHKRDSSSQVKELEALVESSERRVKDLNQSLNSAEEEKKLLSQRISDMSN
EIKQAENTIQKLMSESGQLKESHTEKDKELLSLRGIHETHQRESSTHLRDLEAQLKSSEQ
RVSDLSESLKIAEEENKSMSTKISDISEELERVQITIQELTVESGKLKDQLSEKEAELLH
LTEKESKSQLQIKELEGTVATLELELQSVRARTVDLETEIAGKTSEVEQLEAQNREMVAR
ISELEKTVDKRGTELSALTQKLEDNEKKSSSTIDSLTAEINGLRAELDSVSTQREELETL
MESKGDEASKQIKGLTDEIDGLGQKVVSLESQKAELEIQLERKSEEITSKVKDHDNILEE
RNGLSEKTKGLEVEIETLQKQRSELDEELRAKTEEILQMHDKINEASADKVALTEQINSL
QNELDSLQVKKGETESELDREKQEKSDLSNQIIDVKKALVEQEAAYNMMGEEHKQIKQLL
TEREETLNKLIEDHKEAQRLLEETGNEVSSRDSAIAGHEETTESLRNELEMKGEEIETLM
EKISNIEVKLRLSNQKLRVTEQVLTEKEEAFRREEAKHLEEQAELEKSLAVTHGAYRGMM
KEIAEKVNTTLDVFQSVSGKLAEKQGKYEKTVMEASELLWAATNWVIERNYEKEKMKKEM
ERKEEEIKKLGEKVREDEKEKEMKEEEIKKLGEKVKEDEKEKERKEEEMKKLEEKVREDV
KEKERKEEEIKKLGEKAREDEKEKERMKETLVELGEEKREAIRQLCVWIDHHRGRCEYLE
EVLSKTVVGRGQRQSQRA
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcatcggtttagagagacattgaagtctttctttgagcctcattttgatcat
gagaaaggcgaaatgctcaaaggaacaaaatctgaaatggatgaaaaggtgaagaaaatc
ttgggaatggttgagagtggagacatctacgaagataaatctaaaagacaagtggtttca
gatttagtgaatgaattctacagtgcgtaccagtctctatatcgcaagtacgatgatctg
acaggagatattaagaaaaaggtgcacgggaaaggagaaagctcttcatcatccagctct
gactcggattctgaccattcttcgaagaggaagaccaacagaaatggaaaagtagagaaa
gatgtggagtctgtaacagatggacaaaccgaagctgctgatctgaaagaaaagttgaca
atgagtgttgaagaaaaagaagcagctttggtgaagttaaaagaatcagaagagatcgtc
aggaatttgaaacttgaaactgagaagttagagggcgaaaagacaacagctctgagtgat
agcagagagttacatcagaaactggaaattgcgggagaaacggaaactgatctgagcaag
aggttagaagatatgaaaaatgaaagggatcaactgcaaactgagatagacaatggtatc
aaaagatttcaagaagctgaaaaagttgcagaagactggaaaacaacgagtgatcagctc
aaagatgaagttgctaatttcaagcagcagctagaagcatcagaaaagcgggtttcggat
atgacccagggaatggatagtgcagaggaagagaaaagatctttatccttgaaagtttcg
gagatttcaggtgagatccaacaggcacagaataccatacaagaactcacttccgagctg
ggagagatgaaaggaaaatataaggaaaaagagagtgaacattctagtttggtggtgttg
catgagatccatgagaaagaatcattgagccaagtgaaagaactagaagcacgagtagaa
tcatcagagaaaatgattgcagatttgaacaaaaacctgaataatgcagaggaagagaag
agattgctctctcggagaatctcagaaacctctaatgagattcaagaggcgcagaacacc
atacaagaactcatttctgagtctgaacagttgaaagagagccacagtgtgaaagacaga
gaaatgttcggtttgagggacatccatgagactcatcagagagaatcatccacccgaacg
agtgaactagaagctcaactggaatcctcagagaaccggatctcagatttgaatgcgagt
ctgaaggctgcagaggaagaaaacaaagccatctcctcgaaaaatgtggaaactctagac
aagctagaacaggcacagaagacaatacaagaactcatggctgaattgggagatttgaaa
aatcgacacaaagagaaagagagtgagctttctagtttggtggaggtacatgaggcactt
cagagagattcaacaagtcgagtgaaagaattagtagcagtggtggaatcagcagagcaa
caggttgcagatatgaaacagagtttggacagtgctgaggaagagaaaaaactgctctct
cagaaaatatcagagatttctaaagagattcaagaagcacaaaataccatacaagaactc
atgtctgaaactggaaagttgaaagatagccacggtgagaaggagaaagaactttcaagt
ttgagggacatccacgagactcatcagagagaatcatccacccgagtgagtgaattagaa
gctcagctagaattatcggaacagcgcgtctcagatatgagtgtgagtctgaaggctgca
gaggaagaaaagaagtccatgtcctcgaaaatcttggaaactacggacgagctcaagcag
gcgcagaacaagatagaagaacttatggttgaactgggagaaataaaagaaagactcaag
gaaaaagagagtgagcattctagtttggtggagttacatgagacccatgtgagagaatca
tctagccatgcgaaagaattagaagcgcaaattgagtcatcagagaaattggttgcaggt
ttgaaccaaagcctgaacaatgcagaggaagagaaaaaactgttatctcagaaaatatca
gaaatctccaaagagattcaacaggcgcagaacaccatacaagaactcgtgtctgagtct
gaacagttgaaagagagccacagtgtgaaagaaagagaattttctggtctgagggacatc
cacgagactcatcagagagaatcatccactcgcacgagtgagttagaagctcaactcaaa
tcatcagaacagcgggtctccgagttgagtgcgagtctgaatgttgcagaggaagaaagc
aagtccatgtcctcgaagatcttggaaactacagacgagctcaaacagacgcagaacaag
gtacaaaaactaatggctgaattggcagagacgaaaggtatacacatacaaaaagagagt
gagctttctagtttgttggaggtacacgaggcacataaaagagattcatcgagtcaagtg
aaagaattagaagcgctggtggaatcatcagagcgacgagttaaagatttgaaccagagc
ctgaacagtgctgaggaggagaagaagctgttatctcagcgaatttcagatatgtctaat
gagatcaagcaggcagagaacaccatacaaaaactcatgtccgagtctggacagttaaaa
gagagccacactgagaaagacaaggaacttctcagtttgcggggtatccatgagactcat
cagagagaatcatccactcatttaagagatttagaagcgcaactgaagtcatctgaacaa
agggtttctgatctgagtgaaagtctgaagattgcagaggaagaaaataaatccatgtcc
actaaaatttcagatatttcagaagagctcgaaagggtacagatcacgatacaggaactc
acagttgagtcaggcaaactgaaagaccagctttctgagaaagaagcagaacttttacat
ctaacagagaaggaaagtaaatcacagttgcagataaaagaactagaaggaacagtagcg
acccttgagttggagctacagtcagttcgtgcccggacagtagatcttgagacagaaatt
gctggcaagaccagtgaagttgagcaactggaagcacaaaacagagaaatggttgctaga
atctcggaacttgagaagacagtggacaagagaggaactgaactctctgctttaacccaa
aagctcgaggataacgagaagaaatcatcgtccacaatcgacagtttgacagctgagatc
aatggcctacgagcagaactagattcagtgtctactcaaagagaagagttagagacgcta
atggagagcaaaggcgatgaagcttcaaagcagattaagggtttgacggatgagatcgat
ggtctgggccaaaaagtggtctcacttgaaagccaaaaagcagaactagagattcaactt
gagaggaagtccgaggagatcacaagcaaggtcaaagatcacgataatattctagaagaa
aggaatggtttatctgagaaaaccaagggtcttgaagttgagatagagactctacagaaa
cagagaagtgagcttgacgaggagctaagagctaaaacagaagagatccttcaaatgcat
gataagataaacgaagcctctgctgataaagtggccttaacagaacagatcaacagtctg
cagaatgaacttgattctctgcaggtgaagaagggtgaaaccgaatcagagctcgataga
gagaagcaagagaaatcagatttgtcaaatcagatcatcgatgtcaaaaaagcattggta
gagcaagaagctgcttacaatatgatgggagaggaacacaaacagatcaaacaactgtta
acagaacgcgaggaaacacttaataagctaatagaggatcacaaagaagcccaaaggtta
ttggaggagacaggtaatgaagtatcatccagagattctgcaatcgctggtcatgaagag
acaacggagagtttacgtaacgagctggaaatgaaaggagaagagatagaaactctcatg
gagaagatcagtaacatcgaggttaagctacgtttatctaaccagaaactgagggtgacc
gaacaggtgctaacagagaaagaggaagctttcaggagagaagaagctaaacacttagag
gaacaagcagagcttgagaaaagcctggcggtgactcatggggcttatcgaggtatgatg
aaagagatagcagagaaagtgaacacaacactagatgtctttcaatcagtgtcgggaaaa
ctcgcggagaagcaggggaagtacgagaaaacggtaatggaggcatctgaattactgtgg
gctgcgacgaattgggtgatagagaggaattacgagaaggagaagatgaagaaagagatg
gagaggaaagaagaggaaataaagaagcttggagagaaagtaagagaagatgaaaaggag
aaggagatgaaagaagaggaaataaagaagcttggagagaaagtaaaagaagatgaaaaa
gagaaggagaggaaagaagaggaaatgaagaagcttgaagagaaagtaagggaagatgta
aaggagaaggagaggaaagaagaggaaataaagaagcttggggaaaaagcaagagaagat
gaaaaagagaaggagaggatgaaggagactctcgtggaacttggagaagagaaaagagaa
gcaataaggcaattatgtgtgtggatcgatcatcacagaggtcgctgtgaatatcttgaa
gaggttttgtctaagactgttgtaggtcgagggcaaagacagtcccagcgagcctaa
DBGET
integrated database retrieval system
