Raphanus sativus (radish): 108854391
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Entry
108854391 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-6
KO
K10357
myosin V
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108854391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108854391
04131 Membrane trafficking [BR:
rsz04131
]
108854391
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108854391
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
108854391
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108854391
mRNA cycle factors
P-body specific factors
108854391
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Myosins
108854391
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108854391
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108854391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
108854391
NCBI-ProteinID:
XP_018483435
UniProt:
A0A6J0NFV6
LinkDB
All DBs
Position
4:19152074..19162004
Genome browser
AA seq
1518 aa
AA seq
DB search
MAGNFNPSVGSCVWVEDPDEAWIDGEVVEVNGQEIKVLCTSGKHVVTKVSNVYPKDTEAP
ASGVDDMTRLAYLHEPGVLQNLHSRYDINEIYTYTGSILIAVNPFRRLPHLYSSHMMAQY
KGAALGELSPHPFAVADAAYRQMINDGVSQSILVSGESGAGKTESTKLLMRYLAYMGGRA
AAEGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDEKGRISGAAIRTYLLE
RSRVCQLSDPERNYHCFYMLCAAPKEDVQRYKLGEPKTYHYLNQSKCLEVDSINDAEEYH
ATKRAMEVVGISTEEQDAIFSVVAAILHLGNIEFAKGAEIDSSIPKDEKSLFHLKTAAEL
LSCDEKLLEDSLCKRIMVTRDETITKTLDPEAATLSRDALAKVMYSRLFDWLVDKINTSI
GQDPHSKYLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIN
WSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFAKPKL
ARSDFTICHYAGDVTYQTDLFLDKNKDYVIAEHQALLNSSSCSFVASLFPPMTDDSNKSK
FSSIGTRFKQQLVSLLEILNTTEPHYIRCIKPNNLLKPGIFENENILQQLRCGGVMEAIR
ISCAGYPTRKHFDEFLDRFGILAPEVLVKNSDDPDACKKLLAKVGLEGYQIGKTKVFLRA
GQMADLDTRRTEVLGRSASIIQRKVRSYLAKKSFILLRNAAKQIQSVCRGYLARSVYEGM
RREAAALRIQRDLRMFLARKAYSELFSAAVSVQAGMRGMVARNELCFRRQTKAATIIQTW
CRGYLARLHYRKLKKATITTQCAWRSKIARGELRKLKMAARETGALQEAKNKLEKQVEEL
TWRLQLEKRMRTDLEEAKKQESAKAQSSLEELELRCKETEALLIKEREAAKKVSEIAPII
KEVPVVDNELMEKITNENEKLKEMVSSLEMKIDETEKKLQETTKISQDRLKQALEAESKL
VKLTTAMQKLEEKILDMEAEKKVMRQQTIASTPVRTALGHPPTAPIKNLENGHHTNLESE
FNETEFTTPIDGSAGKSAAERQIMDVDSLIDCVKDNIGFSDNGKPVAAFTIYKCLLHWKC
FESEKTNVFDRLIQMIGSAIENEDDNSHLAYWLTSTSALLFLLEKSLKTGGSGATQSKKP
AASTSLFGRMAMSFRSSPASGNLAAAAEAAANAVIRPVEAKYPALLFKQQLAAYVEKMFG
MVRDNLKKELSTLLSLCIQAPRSSKGGMLRSGRSFGKDSPAVHWQSIIDGLNSLLVTLKE
NHVPLVLIQKIYSQTFSFINVQLFNSLLLRKECCTFSNGEFVKSGLAELELWCCQAKEYA
GPSWEELKQIRQAVGFLVIHQKYRISYDEIAHDLCPGLSVQQLYRICTLYWDDSYNTRSV
SQEVISSMRALMTEESNDADSDSFLLDDDSSIPFSIEDISSSMQEKDFVGIKPAEELLEI
RLLYSCTKTLMKVEKLRY
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaacttcaatccttcagttgggtcgtgtgtgtgggtggaggaccctgatgaa
gcctggattgatggtgaagttgtagaggttaatggccaagagatcaaagtgctttgcact
tcagggaaacatgttgttacaaaagtctctaatgtttatccgaaagatacggaagcgcca
gcatctggagtggacgatatgacaagacttgcttatttgcatgaacccggagttctacag
aatctgcattcaagatatgatataaatgagatttatacttatacaggaagcatactgatt
gctgttaatccgtttagaagactcccccatctttacagtagccatatgatggcacagtat
aaaggagctgctttaggggagctgagtccacatccattcgccgtcgcagatgctgcatat
agacagatgattaatgatggagtcagtcagtctattctggttagtggagaaagtggtgct
ggtaaaactgaaagcaccaagttgctaatgagatatcttgcttatatgggagggagagct
gctgctgagggtaggagtgttgaacagaaagtgttggagtccaatcctgtgctagaagct
ttcggaaatgcaaagactgtcaggaacaacaattcgagtcgttttggtaagttcgtggag
attcagtttgacgaaaagggaaggatatcaggagctgccataagaacttatttgttggaa
agatcacgtgtttgtcagctctctgatcctgaaagaaactatcactgtttctacatgctt
tgtgctgctccaaaagaagatgtgcagagatacaagcttggcgaaccaaagacatatcac
tatctcaatcagtctaaatgcctagaggtggatagtataaatgatgcggaggaataccat
gccactaaacgggctatggaagtggttgggatcagtactgaggagcaggatgcgattttc
agcgttgtggctgccattctccatctcgggaatatcgagtttgctaagggagcagagatt
gattcatcgattcccaaagatgaaaaatcattgtttcacctaaaaactgcagctgagctt
ctcagctgcgatgaaaagttacttgaggattcactatgcaagcgtatcatggtaactcgt
gatgaaaccatcacaaaaacgcttgatccagaagctgctactcttagtagagatgctttg
gctaaagtcatgtactcgcggttgtttgactggcttgttgacaagattaatacctcaatt
ggtcaagatcctcactcgaagtacttgattggtgttctcgatatttatggattcgagagt
ttcaagacaaacagttttgagcaattttgcatcaatctgaccaatgaaaaacttcagcag
cattttaatcagcatgtctttaagatggagcaagaagaatataagaaggaggaaatcaac
tggagctatatagagttcgtagacaatcaagatatcttagacctaatagaaaagaaacct
ggaggtattattgctctgctagatgaagcttgcatgtttccgaggtcaacgcatgaaact
tttgcacagaaactatatcagaccttcaaaaaccacaagcgctttgccaaaccaaaattg
gctcgtagtgacttcacaatttgtcattacgctggtgatgtcacttatcagacggatctt
tttctggacaagaacaaagattacgttattgctgagcatcaagcgttgttaaattcttct
agttgttcctttgtagcaagtttgttcccaccaatgactgacgattccaacaaatcaaag
ttctcatctataggtacccgtttcaagcaacaattggtatcgttgctcgagattctcaat
accacggagccacactatattcgctgtatcaaaccaaataaccttctgaagcccggaatc
tttgagaacgaaaacattttacagcaattacgttgtgggggagtgatggaggctatcagg
attagttgtgctggctatcctaccaggaaacatttcgatgaattcttggacagatttggt
attcttgctccagaagtgttggtcaagaactctgatgaccctgatgcctgcaagaagctt
ctggcgaaagtgggacttgaaggttatcagattggcaagacaaaggtgtttctgagagct
ggacaaatggcagacttggatacccgaaggactgaggtcttgggaagatcagcaagcatt
atccagagaaaagttcggtcgtatcttgctaaaaaaagtttcatccttctgcgtaatgct
gctaagcaaattcaatcagtttgcagaggttatcttgctagaagtgtatatgaaggcatg
cgcagggaagctgctgctttaagaatccagagagacttgcgtatgtttctggctaggaag
gcttactcagagctattttctgctgctgtgtcggtccaagctggtatgcgtggtatggtt
gcccgtaacgaactgtgtttcagaaggcagaccaaagcagcaacaataattcagacttgg
tgccgtggatacttggcccgtctacattacagaaaactaaagaaagcaacaatcacgaca
caatgtgcatggagatcaaaaattgctcgtggagaacttcggaagcttaagatggctgct
cgagaaactggagcacttcaagaagccaagaacaagctagagaagcaagttgaagagctg
acatggagattgcagttggaaaaacggatgaggactgacctggaagaggccaagaaacaa
gaaagtgcaaaagcgcagtcttctttggaggaattggaacttaggtgcaaagaaactgag
gcattgcttattaaagagcgtgaagctgccaagaaagtttcagagattgcccctattatt
aaagaggttccagtggttgataatgaactaatggagaagattactaatgaaaatgaaaag
ctgaaggagatggtgagttcactggaaatgaaaattgacgagacagaaaagaaacttcaa
gagacaaccaagattagccaggatagactgaagcaagcattggaggctgaatctaaacta
gtgaagttgacgactgcaatgcaaaagcttgaagagaaaatcttagacatggaagctgag
aaaaaagttatgcgtcagcaaacaatagcaagcactcctgtgaggactgctcttggacat
cctccaactgcacctattaagaatttggaaaacggccaccatacaaacttggaaagcgag
ttcaatgaaaccgagtttacaacaccaattgatggcagtgctgggaaatctgctgcagaa
cgtcaaattatggatgtcgattctctcattgactgtgtaaaagacaacattggtttcagt
gataatgggaaacctgtggccgcctttacgatatacaagtgtcttcttcactggaagtgt
ttcgaatctgagaagaccaatgtgtttgatcgtctgattcagatgattggttccgccatt
gagaacgaagatgacaatagtcacttggcgtattggttgacaagtacatcagcgctatta
tttttgcttgaaaaaagtcttaaaaccggtggcagtggagcaacacaaagcaagaagcca
gctgcttcaacttctttgtttggaaggatggccatgagcttccgctcgtcacccgcttca
ggcaacctagctgctgcagctgaagccgctgctaacgctgtgatccgtccggtggaggcg
aagtacccggctctgctttttaagcaacagcttgcagcttatgttgagaaaatgtttggg
atggttagagataacttgaagaaagagttgtcgactttactttctttatgcattcaggca
ccaagaagttctaaaggagggatgttgagatctggtagatcatttggaaaagattctccg
gcagttcactggcaaagcattatcgacggtctcaattcgcttcttgtcacattaaaagaa
aatcatgttcctttagtactcatccagaagatatactctcaaactttctctttcatcaac
gtacaacttttcaacagccttcttctgcgtaaagagtgctgtacattcagcaatggagaa
tttgtaaaatccgggcttgccgagctagagctgtggtgttgccaagccaaagaatatgct
ggaccgtcttgggaagaacttaaacaaatcagacaagccgttggattcctggttatacac
cagaagtacagaatctcatacgatgaaatagcacacgatctttgcccgggcctcagtgtc
cagcagctttaccgtatttgcacattatactgggacgatagctataacacccgaagcgtc
tctcaagaagttatatcgagtatgcgggcactcatgacagaggaatccaatgatgcagac
agtgattccttcttattggatgatgattccagcattccattctcaatcgaagatatttca
agttcgatgcaagagaaggactttgtaggaatcaaaccagcagaagagcttcttgagatc
cggcttttgtattcttgcactaagacgctcatgaaagttgagaagctcagatactaa
DBGET
integrated database retrieval system
