Raphanus sativus (radish): 108854409
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Entry
108854409 CDS
T06014
Name
(RefSeq) 3-ketoacyl-CoA synthase 20
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00062
Fatty acid elongation
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz04626
Plant-pathogen interaction
Module
rsz_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
108854409
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108854409
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
108854409
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GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Chal_sti_synt_N
MMPL
Motif
Other DBs
NCBI-GeneID:
108854409
NCBI-ProteinID:
XP_018483461
UniProt:
A0A6J0NH72
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Position
4:complement(19254915..19257691)
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AA seq
526 aa
AA seq
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MTHNQDQPHRPVPVHVINADQNQNNLPNFLLSVRLKYVKLGYHYLISNALYILLLPLLAA
TIANLSSFSLNDLTILYNHLRFHFLSATLATALLIALSTAYFTTRPRRVFLLDFSCYKPD
PSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMEEAR
KEAETVMFGAIDAVLEKTGIKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSYNL
GGMGCSAGLISIDLAKQLLQVQPNSYALVVSTENITQNWYLGNDRSMLLSNCIFRMGGAA
VLLSNRSSDRRRSKYQLIHTVRTHKGADDNAFGCVYQREDNNAEETGKVGVSLSKNLMAI
AGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKVKKIKPYIPDFKLAFEHFCIHAGG
RAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAF
GSGFKCNSAVWKALRTIDPVEKSNPWSDEIHEFPVAVPRITPVTSS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacccataaccaagaccaacctcaccgtcctgtcccggtccatgtcataaacgccgac
cagaaccaaaacaacctcccgaacttcctcttatccgttcgtctcaaatacgtcaaactc
ggttaccattacctaatctccaacgctctctacatcctcctcctccctctcctcgccgcc
acaatcgcaaacctctcttctttctccctcaacgacctaactatcctctacaaccacctc
cgtttccatttcctctccgccacactcgccactgcgctattaatcgctctctccaccgct
tacttcaccactcgtcctcgccgtgtcttcctcctcgacttctcatgttacaaaccagac
ccttctctgatctgcactcgagaaacattcatggaccgttctcaacgtgtaggtatcttc
acggaagataatctcgctttccaacaaaagatcctagagagatccggtcttggtcagaag
acgtacttccctgaagcccttcttcgtgttcctccaaatccttgcatggaggaagcgaga
aaagaagccgagactgttatgttcggagctatcgacgctgttcttgagaaaaccggtatt
aaaccgaaagatattggaattcttgtggtgaattgtagtttgtttaatccgacgccgtca
ctttctgcaatgattgtgaataagtataagcttagagggaatattttgagctataatctc
ggtggaatgggttgtagtgctggtcttatctccattgatctcgctaaacagcttctccag
gtccaaccaaactcatacgccctagtggtgagcacagagaacataacccaaaactggtac
ttaggcaatgaccgatcaatgcttctatctaattgcatcttccgtatgggtggagccgcc
gtacttctctcgaaccgttcgtccgatcgcaggcgctcaaaatatcagctcatccacacc
gtccgtacccacaaaggagctgacgacaacgcatttggctgtgtttaccaacgagaagac
aacaacgcagaagaaaccggcaaagtcggagtctctctttctaaaaacctaatggcaata
gccggagaagcactcaagacaaacatcacaactctcggaccgctcgtcctacccatgtcc
gaacagcttctctttttcgcaaccctggtggcacgcaaagtcttcaaagtcaagaaaata
aagccttacattcccgacttcaagctagcgttcgagcatttctgcatccatgctggaggt
agagccgtgctcgacgagatagagaagaatttggatttgtccgaatggcatatggagcca
tcgaggatgacgttgaaccgttttggtaatacttcgagtagctcgctttggtatgaactt
gcttatagtgaagctaaagggaggattaagagaggagacaggacttggcagattgctttt
ggatcgggctttaagtgtaatagtgcggtctggaaagccttgagaacgattgatccggtt
gagaagtctaacccatggagcgatgagattcatgagttccctgttgcagttcctagaatc
acccccgttacgtcctcgtag
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