KEGG   Raphanus sativus (radish): 108854416
Entry
108854416         CDS       T06014                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108854416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108854416
   03041 Spliceosome [BR:rsz03041]
    108854416
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108854416
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108854416
Spliceosome [BR:rsz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108854416
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 108854416
NCBI-ProteinID: XP_018483467
UniProt: A0A6J0NI36
LinkDB
Position
4:41501655..41505351
AA seq 441 aa
MAERKRKLEPQSNDDAATEEQPPQKQQLQFENGDEGIITTEINKKENDDDRDENQRPEED
DGEPIEDLLEPFSKEQLSILLKEAAEKHRDVADRIRIVADEDPVHRKIFVHGFAWDTKAD
ALIKAFKQYGEIEDCKCVVDKVTGQSKGYGFILFKSRSGARGALKQPQKKIGTRMAACQL
ASMGPVQGGGNTVVGASSQHFNPEHVQRKIYVSNVSAEIDPQRLLEFFSRFGEVEEGPLG
LDKATGRPKGFTLFVYKTAESAKKALEEPHKSFEGHVLHCHKANDGPKPVKQQHQHHQNN
YNQRSRYQRNEDTGYGASGGHGHFLAGNGNNQGLNPAIGQAITAALLASQGAGVGMNQAF
GQALLGTLGAPSPGAVGGMPSGYGTQANMTPEVFPGYGFQGGYQGGYQTQLPGQGGYQSQ
QPGQGGAGRGQHGLGYGGQYM
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggcagaaaggaagagaaagctcgaacctcaatccaacgacgacgccgccacagaggag
caacccccgcagaagcagcagctccaattcgaaaacggcgacgaaggaatcatcaccaca
gagatcaacaaaaaggaaaacgacgacgatagagacgagaatcaacgccctgaggaagac
gacggagagccgatcgaagatctcctggaaccgttttcgaaggaacagctctcgattctc
ctcaaggaagcagcggagaagcaccgcgacgtggccgatcggatccgaatcgttgcggac
gaggatccggttcaccgcaagatcttcgtgcacggattcgcgtgggacaccaaagcggac
gcgctaatcaaagcgtttaagcagtatggagagatcgaggattgcaaatgcgtcgtcgat
aaggtcacgggacagtccaaaggctacgggtttatcctattcaagtcgcgttccggcgct
cgcggggctctcaagcagcctcagaagaagatagggactcgtatggctgcgtgtcagtta
gcttccatgggacctgttcaaggaggagggaacactgtggtgggggcgagttctcagcat
tttaaccctgagcatgttcagaggaagatctatgttagtaacgtgagcgcggagattgat
ccgcagaggttgcttgagtttttctcgaggtttggggaggtggaagaaggtccgttgggg
cttgataaagctactgggagacctaaaggtttcactttgtttgtgtataagactgcggag
agtgctaagaaggcgttggaggagccgcataagagctttgaaggccatgtgttgcattgc
cataaagctaacgacgggcctaaacctgttaagcagcagcatcagcatcaccagaacaat
tataatcaacgttcacgctaccaaaggaacgaagacactggttacggtgcaagtggagga
catgggcatttcttagctggtaatggtaataaccaggggttaaacccagcaattggtcag
gccatcacggcggctttgctggcgtctcaaggtgctggagtgggtatgaaccaagcgttt
ggacaggcgttgttggggactttgggggcgcctagcccaggagcggtaggtggaatgcca
agtggctatggtactcaagcgaatatgacaccagaggtctttcctggttacggtttccaa
ggtggttatcagggaggttatcagactcagcttcctggtcagggaggttatcagagtcag
caacctggccagggcggtgctggaagagggcagcatggtttagggtatggtggtcagtac
atgtaa

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