Raphanus sativus (radish): 108854452
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Entry
108854452 CDS
T06014
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108854452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108854452
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
108854452
Prokaryotic type
Archaeal type
TFB
108854452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
108854452
NCBI-ProteinID:
XP_018483520
UniProt:
A0A6J0NG33
LinkDB
All DBs
Position
4:813952..817969
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AA seq
499 aa
AA seq
DB search
MKCPYCSSAQGRCATATSGRSITECTSCGRVVEERQTQNHHLFHLRAQDTPLCLVTPDLQ
PPAAQPSPADEEDPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLELASNSS
SSSTVVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATACL
VQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLL
QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTE
VTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPSLADRDK
PPVKPVETSDHANQQQEHKGKEEKHPKFRQPWLFGTASVMSPGEMVSEPDKPDFDKQQQQ
LGDKETLPTYLRQHNQFPSSSSPSSSISTINWSFRPSGGTGSSSSLPVVHPPKLPPGYAE
IRGSGSQSGNKNANNPHGD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtccttactgttcatcggcgcaaggacggtgcgccaccgcaacctccggcaga
tcgataacggaatgcacctcatgcggccgcgtagtggaagaacgccagacgcaaaaccac
cacctcttccatctccgcgcgcaagacactcctctctgcctcgtcactcccgatctccaa
ccccccgccgcgcaaccgtctccagccgacgaggaagatccgttcgagccaaccgggttc
atcaccgccttctcaacatggtcactcgagccgagcccgatcttcgcccgctcctccctc
tccttctccggtcacctcgccgagctcgagcgaaccctggagctcgcttcgaattcgtcg
tcgtcgtcgacggttgtggtggtggataacctgagggcttatatgcagatcatcgacgtg
gcgtcgattctggggctggattgcgatatctctgagcatgctttccagttgtttagggat
tgctgctcagctacttgcttgaggaacagaagcgtcgaagccttggccactgcttgtctt
gttcaagctattagagaagctcaggagcctagaactcttcaggagatctccattgcagcc
aatgtacagcagaaggaaattggcaagtacatcaagattttaggagaagctctacaacta
agtcaacctatcaacagcaactctatatctgttcatatgccaagattctgcaccctcctt
caacttaacaaatctgctcaggaactggcaacacacatcggagaagtggtgatcaacaag
tgcttctgcacccgtagaaaccctatcagcatttctgcagctgctatctatctagcatgt
cagcttgaagacaaacgaaagacgcaagctgagatttgtaagataaccggattaacggaa
gtaaccctgcgaaaagtgtataaggagcttctggagaattgggacgaccttctcccgtct
aactacacaccagccgtcccaccagagaaagcattccctacaaccacaatctctacaacc
cgctcaacaactcctagagccgtggatccacctgaaccgagtttagcagacagagacaag
ccaccggttaaacccgtggaaacatctgatcatgccaaccaacaacaagaacacaaaggc
aaagaagaaaagcatccgaaattcagacagccttggctgtttggaactgccagtgtcatg
agcccaggggaaatggtaagcgagccggataaacctgactttgataagcagcagcagcag
ctaggggataaggaaacactgcctacatatctcagacaacataaccaattcccttcgagt
tcatctccatcttcaagtatcagcacaatcaactggtcattcagaccttctggtggtacc
gggtcctcaagcagcttgcctgttgttcatccgccgaaactgcctccgggttatgctgag
atcagaggcagtggatctcaatcaggaaacaagaatgctaataatccacatggagattag
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integrated database retrieval system
