Raphanus sativus (radish): 108854575
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Entry
108854575 CDS
T06014
Name
(RefSeq) THO complex subunit 4D
KO
K12881
THO complex subunit 4
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
rsz03015
mRNA surveillance pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108854575
09122 Translation
03013 Nucleocytoplasmic transport
108854575
03015 mRNA surveillance pathway
108854575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108854575
03041 Spliceosome [BR:
rsz03041
]
108854575
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108854575
TREX complex
108854575
Spliceosome [BR:
rsz03041
]
Complex C
Other components
EJC/TREX
108854575
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108854575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
108854575
NCBI-ProteinID:
XP_018483676
UniProt:
A0A6J0NHS7
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All DBs
Position
4:complement(28941566..28944187)
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AA seq
286 aa
AA seq
DB search
MSGGLDMTLDESIKRAKAAKSGGRGTSRRGGGGRRDHGPNGFLGGRGNGPARRGPLAVNS
RTSSFTINKPVRRTRSVPWQNGLFEDGLRAAGVDVETRLHITNLDNGVTNDDIRELFSEI
GELKRYAIHFDKNGRPSGTAEVVYPRRSDAIQALKKYNNVLLDGRPMRLEILGGNNAEAP
PLSGRVNVNVSGLNGRLKRTVVIQQGGRGNGRLRGRGGRGPAPAVNRLPIQNRQGGGRGG
FRGGRGRGGRGRGGGGRGNGKKPVEKSAADLDKDLESYHADAMNTS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaggtttagatatgacacttgatgaatctataaagagggctaaggctgcaaaa
tctggaggcagaggcacttcccgccgtggtggtggtggtcgtcgtgatcacggacctaac
gggtttcttggtggaagaggcaacggacctgctcgaagaggccctcttgctgtgaattct
cggacctcatctttcaccattaacaagcctgttcgtaggaccagaagcgtgccatggcag
aatggtttgtttgaagatggcctaagagctgctggagtagacgttgaaaccaggctccat
atcaccaacctggacaatggtgtaacaaacgatgatataagggaactcttctctgaaatt
ggggagctcaaacgttatgcgattcattttgataaaaatgggcgtccaagtggcacagcg
gaagtggtgtatccaagaagaagtgatgcaattcaagctctgaagaaatacaacaacgtg
ttgttggatggaaggccaatgagacttgagatattgggtggaaacaacgctgaggctcct
cctttatctggtcgtgtgaatgtgaatgtctctggactcaatggaaggctgaagaggacg
gtcgttatccagcaaggagggagaggtaatggtagattgagagggagaggaggaagaggt
ccagctcctgctgtcaatcgtcttccaattcaaaaccggcagggaggaggaaggggtggg
tttcgtggtggtagagggagaggtggacgtggccgtggtggtggtgggagagggaatggg
aagaagccagtggagaaatcagctgctgaccttgacaaggatcttgagagctatcacgca
gatgcaatgaacacttcttaa
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integrated database retrieval system