Raphanus sativus (radish): 108854609
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Entry
108854609 CDS
T06014
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-1
KO
K03265
peptide chain release factor subunit 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108854609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108854609
03012 Translation factors [BR:
rsz03012
]
108854609
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108854609
Translation factors [BR:
rsz03012
]
Eukaryotic type
Release factors
108854609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
108854609
NCBI-ProteinID:
XP_018483715
UniProt:
A0A6J0NGN8
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Position
4:12090767..12093391
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AA seq
434 aa
AA seq
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MGDNHGDDKNIEIWKIKKLIKSLEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVNDEGKEKKVTIDFEPFKPIN
NTLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLAAKILNVVDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTG
KYVFGVEDTLNALDSGAVETLIVWENLDINRYVLKNSATGETVIKHLNKEQEANTENFKA
DNSDLDVEDKMSLLEWLANEYKRFGCALEFVTNKSQEGSQFCRGFGGIGGILRYQLDMTA
FDEDLDVYDDDESE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaatcatggtgacgacaagaacattgagatatggaagattaagaagctcatc
aagtcccttgaagctgccaggggtaatggaaccagcatgatctcgctcatcatgcctcca
cgtgatcaggtctctcgtgtcacaaagatgttgggcgatgagtatggaacggcttccaac
atcaagagcagagtcaatcgccagtctgttttgggtgccatcacttctgcgcagcaaagg
ctgaaactttacaaccgggtccctcccaatggtctagttctctacactggaaccattgtc
aacgacgaaggcaaggagaagaaggtgaccattgactttgagcctttcaagcccattaac
aacacactctacctctgcgacaacaagttccacaccgaagctctgaacgagttgctggag
tctgatgacaagtttggtttcattgtgatggacgggaacgggactctctttggaaccctg
agcggtaacactcgcgaggtgcttcacaagttctctgttgatcttccgaagaagcacggg
agaggagggcagtctgcgcttcggtttgcacgtctgcgtatggagaagcgtcacaactac
gtgaggaaaacggctgagctcgccacgcagtactacatcaaccccgcgacgagtcagcct
aatgtgtctggtctgatactcgccggttctgctgatttcaagactgagctgagccaatct
gacatgttcgatccccggcttgctgcaaagatacttaacgtggtggacgtatcatacgga
ggagaaaacggtttcaaccaggccatcgagctctcgtctgagatccttgcgaacgtgaag
ttcatccaggagaagcgtttgatagggaagtactttgaggagattagtcaggacacgggg
aagtatgtgtttggtgtggaggatactttgaacgctttggattcaggtgctgttgagacg
ctgatcgtatgggagaaccttgacatcaacagatacgtgttgaagaacagtgccactggt
gaaactgtgataaagcacctgaacaaggaacaggaagccaacactgagaacttcaaagca
gacaatagcgacttggacgtggaggataagatgtcgctgcttgagtggctggctaacgag
tacaagcgttttgggtgtgcgctggagtttgtgacgaacaagtcgcaggaagggtctcag
ttttgcagagggtttggaggaataggagggatacttcgttaccagcttgacatgactgct
tttgatgaggatttggatgtttatgatgatgatgaatcagaatag
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