Raphanus sativus (radish): 108854677
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Entry
108854677 CDS
T06014
Name
(RefSeq) EIN3-binding F-box protein 1
KO
K14515
EIN3-binding F-box protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04016
MAPK signaling pathway - plant
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108854677
04075 Plant hormone signal transduction
108854677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108854677
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108854677
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_NXF1-5
Inhibitor_I68
Motif
Other DBs
NCBI-GeneID:
108854677
NCBI-ProteinID:
XP_018483795
UniProt:
A0A6J0NGW6
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Position
4:complement(34867256..34870150)
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AA seq
624 aa
AA seq
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MSQIYSFAGENDCYRRGSIYSNPKEANLFPSLVDCYYPPCKRSRVFAAPSSLFSAFEEKK
PVSIDVLPDECLFEIFRRLPGPQERTACAFVSKQWLTLVTSIRQSELDVVVVAEDDCEGC
LSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSVRGSDKVSDLGLRAIGRSCSSLASLSLC
SLSNVTDVGLLEIAEGCPRLEKLDLSRCPAITDKGLAAIAKSCCDLSELTLEGCSSIGDE
GLAAIAKSCSKLKSVSIKNCPLVRDQGVAALLSNTTCSLMKLKLQMVNVTDVSLAVVGHY
GLSVTELVLAGLSHVTEKGFWVMGNGVGLQKLNSLTITACQGVTDTGLESVGKGCPNMKK
ALISKSPLLSDNGLVSFAKGALSLESVQLEECHRVTQFGFFGSLLNCGAKLKAFSMVNCL
GIRDLTTGLPSSAANCSGLRSLSVRNCPGFGDANLAALGKLCPQLEDIEMCGLKGVTESG
FLHLLDNSLVKVNFSGCSGLTDRVVSAISARNGLTLEVLNMDGCSKISDASLVSIAANCQ
ILSDLDLSKCSVSDSGVQALASSEKLKLQILSMAGCFMVTDKSLPAIVKLGSTLLGLNLQ
QCRSISTSTVDFLVERLYKCDILS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatctacagcttcgctggtgaaaatgattgttaccgtcgtggctcaatttac
tcaaatccaaaggaagctaaccttttcccgtctcttgtcgattgctattaccctccttgc
aagagatctcgcgtctttgctgctccttcttctctcttcagcgctttcgaggagaaaaag
ccagtctctatcgatgtccttcccgacgagtgcctcttcgagatcttcagacgtttacct
ggaccgcaggagagaaccgcttgcgctttcgtctccaaacagtggcttactctcgtaacc
agcattagacaaagcgagcttgatgttgttgttgttgccgaagatgactgtgaagggtgc
ttatctaggagcttagatgggaagaaggcgaccgatgttagactagctgctatcgctgtc
ggaacagctggccgtggtggactcgggaaactctcggttcgtggaagcgataaggtttcg
gatcttggtcttagagcgattggtcggagctgctcttctctcgcgtctctttccctgtgc
agcctttccaacgttaccgacgttggtctcttggagatcgctgagggttgccctcggctt
gagaagcttgacctgagccgttgccctgcaatcactgataagggtttggcggcgattgct
aagagctgttgtgatttgagtgagcttactttggagggttgttcgagtatcggagatgaa
ggtttggcagcgattgctaagagctgctccaagcttaagtcggtgtctatcaagaactgt
cctctggtcagggatcaaggagtcgccgcgttactgtctaacaccacgtgttccctgatg
aaacttaagcttcagatggttaatgtcactgacgtgtctcttgcggtcgtgggtcattac
ggcttgtcggtcacggaacttgtgcttgcgggtttgtcgcacgtgacggagaaagggttc
tgggtgatgggaaatggtgtcgggcttcaaaagttgaactctttaaccatcacagcatgc
cagggagtgactgacacagggcttgaatctgttgggaagggatgcccaaacatgaagaag
gcgttgatcagtaaatccccgttgttgtctgacaacggtttggtctcttttgcgaaaggt
gctttgtcgttggagagtgttcagcttgaagagtgccacagggtcacccagtttgggttt
tttggttctcttttgaactgtggtgcaaagctgaaggctttctctatggtgaactgtttg
gggatcagagatctcaccactggattaccttcttcggcggctaattgcagtggtctacgc
tctctgtctgttcgtaactgccccgggtttggagatgcgaaccttgccgcccttgggaag
ctatgccctcagctggaagatatcgagatgtgtgggctcaagggggtgacagagtctggt
tttctacatctgctcgacaactctcttgtgaaggtgaacttcagtggctgttccggtttg
acagacagagttgtctccgccatctctgctcgtaacggcttgactctcgaagtcttgaac
atggatggatgtagcaagatctctgacgccagcctagtctccattgcagcgaactgccag
attctaagtgatttggatctttcgaaatgctcggtctcagattccggagttcaagcattg
gcttcctctgaaaaactcaaactgcagatcctatccatggcgggttgctttatggtcact
gacaagagcttaccagccatcgttaagctgggttcgactctactgggattaaatctccaa
cagtgtcgatccatttccacttccactgtcgacttcttagtcgagaggctttacaaatgc
gacatcctctcctga
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