Raphanus sativus (radish): 108854740
Help
Entry
108854740 CDS
T06014
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108854740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108854740
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108854740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
BIG2_C
DCB
Sec7-like_HDS
Mon2_C
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
108854740
NCBI-ProteinID:
XP_056865488
UniProt:
A0A9W3DP84
LinkDB
All DBs
Position
4:complement(51105768..51112219)
Genome browser
AA seq
1776 aa
AA seq
DB search
MASSEVDSRLSRVVTPALEKIVKNASWRKHSKLAAECKSVIELLNSPRKSPDPDDSSSSS
VPPGPLNDGGSVEYSLADSEHIFAPLINACGTGLVKIVEPAIDCVQKLIAHGYIRGESDP
SGGAESILLFKLIESVCKCHDLGDEAIELPVLKTLLSAINSISLRIHGDCLLLIVRTCYD
IYLGSKNVVNQTTAKASLIQILVIVFRRMEADSSTAPIQPIVVAELMQPVEKSDADGTMT
QFVQGFITKIMQDIDGVLNPTMVGAVGQDAGGLGSSTTVETTNPTDLLDSTDKDMLDAKY
WEISMYKSALEGRKGELADVEAERDDDLEVQIENKLRRDAFLVFRALCKLSMKTAPKESS
TDPQSMRGKILALELLKILLENAGDIFRTSERFLGAIKQYLCLSLLKNSASTLMIIFQLS
CSIFISLVARFRAGLKAEIGVFFPMIVLRVVENVAQPNFQQKMIVLRFLDKLCLDSQILV
DIFLNYDCDVSSSNIFERMVNGLLKTAQGAPTATSSTLLPPQEAAMKLEAMKCLVAILKS
MGEWLNKQLRLPVSNSLNKSEALEIDLGPGSPQLANGNADESADGSDTYSESPGGTSDAL
AIEQRRAYKLELQEGISLFNRKPTKGIEFLINAGKVGESPEEIAAFLKDASGLNKSLIGD
YLGEREELHLKVMHAYVDSFDFQEMEFDEAIRTFLEGFRLPGEAQKIDRIMEKFAERYCK
CNPKVFTSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPADYMRS
LYERITKKEIKMKEDDLNLQQKQSTSSNRMLGLDGILNIVIRKQGGDSYVETSDDLMKHM
QEQFKEKARKSESTYYAATDVVILRFMIEACWAPMLAAFSVPLDQSDDLTVIHLCLEGFH
HAIHATSLMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIEAIKAILKLADEEGNYLQDAW
EHILTCVSRFEQLHLLGEGAPPDAAFFASKQNESEKSKQPKLNVLPVLKKKGPGKSQYAA
TGVLRGSYDSMSFGGKGSRNVRQDQMSSIVSNLNLLEQVGEMNLIFAQSQNLNSEAIIDF
VKALCKVSIDELRSPSNPRVFSLTKIVEIAHYNMNRIRLVWSSIWQVLSGFFVTIGCSEN
LSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMTPFVIVMRRSNDVEIRELIIRCVSQM
VLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVFLSFEIIEKIIREYFPYITETETTTFTDC
VNCLVAFTNNRFSKDISLRSIAFLRYCATKLAEGNLKSPSTNKDKETSGKTPQSSLQTGK
SGRLENGEIVNSNNQLYFWFPLLAGLSELSFDPRPEIRKSALQILFDTLRNHGHLFSLPL
WEKVFESVLFPIFDYVRHGIDPTGGDESPDQGSHGDVDEIDHDAWLYETCTLALQLVVDL
FVKFYTTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSDAGVLFSEEKWLEVVSS
LKESAKTTCPDFSYFLSEEYVERSQRNAESVAPVGSDGNEESQTTALRLYAAISDAKCRA
AVQLLLIQAVMEIYNMYRPQLSAKNTLVLFDALHGVALHAHSVNSNSILRSRLQELGPMT
QMQDPPLLRLENESYQICLTFLQNLVTDESKEAGEEEEEEIESLLVKTCQEVLNFYIETS
SSAKKQQSESSRGSGYRWRIPLGSGKRRELAARAPLIVATLQAMCTLEEASFEKNMKSLF
PLLASLISCEHGSSEVQVALADMLGLSVGPVLLQWC
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcggaagtcgattcccgactgagccgagtcgtaacgccagctctagagaag
atcgtcaagaacgcttcgtggcgtaaacactccaagctcgccgccgagtgcaaatccgtc
atcgagctgctcaattcgccgcggaaatcgcccgatcccgacgattcctcctcctcctcc
gttcctccaggtccgcttaacgacggcggctcggtggaatactcgctcgccgactccgaa
cacatcttcgcccctctgatcaacgcctgcggcaccggcctggtgaagatcgtcgagcct
gcgatcgactgcgttcagaaactcatcgcgcacggctacattcgcggcgaatcggatccg
tcgggtggagctgagtcaatcctcttgtttaaactgatcgagtctgtttgtaagtgccac
gatctaggagacgaagcgattgagctgcctgtgctcaagactctgttatcagcgatcaac
tccatctccctgaggatccacggggactgtttgcttctgatcgtgcgcacgtgctacgat
atttacttgggaagcaaaaacgtggtgaatcagacgactgctaaggcgtctctgattcag
atattagtgattgtgtttcggagaatggaggcggattcatcaaccgcccccattcagccg
attgtagtggctgagctaatgcagccggttgagaaatctgatgcggatgggacgatgacg
cagtttgttcagggcttcatcaccaagattatgcaggatatcgacggggtgttgaatccg
acgatggtgggggcggtggggcaagatgcggggggactggggagtagtacgacggtggag
acgacgaatccgacggatttgttggactctactgataaggatatgttggatgctaagtat
tgggagatcagtatgtataagtcggcgctagagggaaggaagggggagcttgcagacgtt
gaagctgagagagatgatgatttggaggttcagattgagaataagctgcggagagatgcg
ttcttggtgtttagggctctgtgtaagctgtctatgaagacggctcctaaggagtcttcg
acagatccgcagtcgatgagagggaagattctggctcttgagttattgaagatcttgttg
gaaaatgctggggatatctttaggacgagcgaaaggttcttaggtgctatcaaacagtac
ttgtgtttgtcgttgttgaagaacagcgcttctactcttatgattatcttccagctttct
tgctctatttttatcagtctggttgcaagattccgggctggactgaaagcggaaatcgga
gtgttcttcccaatgattgttcttagagtcgtggagaatgttgctcaaccaaattttcag
cagaagatgattgttcttcggtttctcgacaagctttgcttggattcacaaatcctggtt
gatatattcttgaactacgattgtgatgtcagctcatcaaatatttttgagaggatggtc
aatggtctccttaaaacggctcaaggggctcctactgctacatcttcaacgctgttgcca
cctcaggaggcagctatgaaacttgaagccatgaagtgcttagtagccatattgaaatca
atgggagaatggttgaacaagcagttgcgcctgccagtttctaattcgctgaataaatct
gaagcacttgagatcgatctgggacccggaagtcctcagttggcaaatggaaatgctgat
gagtctgctgacggatcagatacctattctgaatctccaggaggtacatctgatgctctg
gccatcgagcagcgccgggcttacaagctcgaacttcaggaaggtatttctctttttaat
cggaagccaacaaaaggcattgagtttctcatcaatgcgggtaaggtgggtgagtctcct
gaagaaatagcagcttttctcaaagatgcgtcagggttaaataaatctttgataggcgat
tatcttggggaaagagaagagttacatctcaaggtgatgcatgcgtatgtggattctttt
gatttccaagagatggaatttgatgaggcaataagaacctttctggaaggttttaggctg
ccaggagaagcacaaaagattgaccgaatcatggaaaagtttgctgaacgttactgcaag
tgtaatcctaaggtgtttactagtgcagacacagcttatgttcttgcatattctgtgatc
atgctcaatactgatgcccacaatcccatggtgaagaacaagatgtctgccgatgacttt
attagaaacaatcggggaatagacgacggaaaagatttacctgcggactacatgagatcg
ctgtatgaacggataactaagaaagagataaagatgaaagaagatgatttaaatttgcaa
cagaaacaatccacaagctcaaacagaatgcttggtttggatggtatattaaacatagtg
atccgtaagcaggggggagattcatatgttgaaacaagcgatgatctgatgaagcatatg
caagagcagtttaaggaaaaagctcgcaaatcagagtcaacctactatgctgcaacagat
gtggttattctccgattcatgattgaggcttgttgggctcctatgcttgctgcattcagt
gtgccgctagaccagagtgatgatttgacagttatccacttatgtctggaaggcttccac
catgcaatccatgctacttcgttgatgtcaatgaagactcatagagatgcttttgtgact
tcactagcgaagttcacttcacttcactccccagcggatatcaagcaaaaaaatattgag
gccattaaggcgattctcaaacttgctgatgaagagggcaactatttgcaagatgcctgg
gagcatatactaacttgtgtttcccgttttgagcaactacatctcttgggagaaggtgct
cctcccgatgccgctttttttgcttccaagcaaaatgagtcagagaaatcaaagcaaccc
aaactaaatgtgcttcctgttctgaaaaagaaaggtcccgggaaaagtcaatatgcagct
accggtgtcctgaggggttcatatgacagcatgagttttggtggaaaaggttctaggaac
gtgagacaagaccagatgagcagtatagtctctaatttaaacctgttggagcaggttggt
gaaatgaatctaatattcgcacagagtcagaatctgaacagtgaagctataatagacttt
gttaaagctctctgcaaagtttctatcgatgagttgcggtctccttctaatccacgcgtt
tttagcctcacaaagattgttgagatagcgcattataacatgaaccgcataaggcttgtt
tggtcaagcatctggcaagtgctatcgggtttctttgtgaccattggatgctcagagaat
ctttctattgcaatttttgcgatggactctttgcgccagttgtcaatgaaattcctggaa
cgggaggagttggctaattacaacttccagaacgagtttatgacaccttttgtcattgtt
atgcgtagaagtaatgatgttgagatcagagaacttatcatccgatgtgtttctcagatg
gtattgtcgcgtgtaaataatgttaagtcgggatggaaaagcatgttcatggtttttacc
acagcagcatatgacgaccacaagaatattgtttttctatcctttgagattatcgagaag
attattcgagaatatttcccatacataactgagacagaaaccaccacttttacagattgt
gtgaactgccttgttgcattcaccaacaacaggtttagcaaggatatcagtctccggtcc
atcgctttcctccggtattgtgcaacaaagcttgcagaaggaaatcttaaatcaccatca
acgaacaaagacaaggaaacttccggaaagactcctcagtcatctctccaaacaggaaaa
agcggaagactagagaacggagagatcgtaaacagcaataatcagctatacttttggttt
cctctactagcaggcttgtcagagcttagtttcgatccaagaccagaaatcaggaaaagt
gctctacagattctgttcgacaccttacgcaaccacggccacttattttctctcccatta
tgggaaaaagtattcgaatctgtgttatttcctatatttgactacgtacggcatggtatt
gatccaactggcggagacgagtctccagatcaaggaagtcatggtgatgtggacgagata
gaccatgatgcttggctatacgagacctgcacgttagcactacagcttgttgtggatctc
tttgtcaaattctacactacagtcaatccacttctaaagaaagtactaatgcttcttgtg
agcttcataaagagacctcaccagagccttgcagggattggtatcgctgcgtttgttcgt
cttatgagcgacgctggtgtcttgttttctgaagagaaatggttagaagtagtgtcgtct
ttgaaagaatcggccaagacgacgtgtccagacttttcttatttcctcagcgaagagtat
gtggagagaagccagagaaatgcagagtctgtggctccagttggctcggatggtaatgaa
gagagtcagacaacagcactccgcctttacgccgctatctctgatgctaagtgccgtgct
gctgttcagcttttgttgattcaggctgtgatggagatctacaacatgtacagacctcag
ctctcagcgaaaaacacgttagttctcttcgacgcattgcacggtgtagcgttacatgct
cacagcgtaaacagcaactcgatactccgttcaagactacaagagctaggacccatgacg
caaatgcaagatcctccactacttcgtctcgagaacgagtcttaccaaatctgcctcacg
ttcttacagaatctcgtcacagacgaaagcaaagaagcaggagaagaagaagaagaggaa
atagagtcactcctagtcaaaacctgtcaagaagttctcaacttctacatcgaaacctct
tcttctgcgaaaaaacaacagtcagagtcatcacgaggaagcgggtaccgatggaggata
cctctgggatcagggaaacgaagggagttagcagcaagagctcctcttatagttgcaaca
ctccaagcgatgtgtacattggaagaagcatcgtttgagaagaacatgaagtctctgttt
ccacttctggctagcttgattagctgcgaacacgggtctagtgaggttcaggttgctctt
gccgacatgctcggcttatcggttggtccagttctactccagtggtgctga
DBGET
integrated database retrieval system
