Raphanus sativus (radish): 108854787
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Entry
108854787 CDS
T06014
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108854787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108854787
03036 Chromosome and associated proteins [BR:
rsz03036
]
108854787
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108854787
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
108854787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
108854787
NCBI-ProteinID:
XP_018483952
UniProt:
A0A6J0NGS8
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All DBs
Position
4:complement(11242836..11250152)
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AA seq
1205 aa
AA seq
DB search
MDAASNNTTASNVAQAILAVLDYNSTPDARRAAVAFLESIKCGDIRVLAHVSLFLVKKEC
SSEIRLHAFKMLQHLVRLRWEELSPSERRDFAKVSVDLMSEIASPSEEWSLKSQSAALVA
EIVRREGPDLWQELFPSLTSLSAQGPLQAEVVSMMLRWLPEDITVHNEDLEGDRRRLLLR
GLTQSLPEILPLLYNLLERHFGAAMNEASRLHADLAKQHAAVVIACLNAINAYAEWAPVL
DLSRYGIINGCGALLSSPDFRLHACDFFKLVCSRKRPSDVFGTEYDAAISSLFQSLMNVS
REFLYRSASSGGGIDESDYEFAECICESLVSLGSTNLQCIATDGGVLALYLQQMLGFFQH
FKLGLHFEAMLFWLALMRDLLTKPKAAANPSGEGLAIGGIQSSSQVDNEKKKILGLISDD
IASTILDVSFQRMLKKEKVSPRIAPSLGPLELWSDEFEGKGEFGQYRSRLLDLVKFVTSH
KPLVASTKISERIITLIKDLLASPVPLQDVAVLDSQQLAFDCVVATVFDGSNEFAGGSSD
VHFSLRGIFEGLLQQLLSLKLTEPELIKMHGHYLDAMGPFLKYFPDAVGNVINKLFEMLT
SLPHMVKDPATSTSRVARLQICTSFIRIAKTADKSVLPHMKSIADRMAYMQREGTLLRGE
HNILGEAFLVMASAAGAQQQQEVLAWLLEPLSQQWIQSEWQNCYLSDPMGLVRLCSNTPF
MWSLFHTVTFFEKALKRSGHRKTNLNTTSVTSQDLHPMAHHLSWMLPPLLKLLRVIHSLW
SPSVYQTLPPEMRAAMTMADVERYSLLGEAIPKFSKVSSVYADGSFDGGKEGLTEANESD
VRNWLKGIRDSGYCVLGLSATIGDTFFKCLDANYVAVALMENLQSMEFRHMRQLIHSFVV
YVVKSCPADMWESWLEVLLHPLFIHCQKAISSSWASLMREGRAQVPDSFGVQNGPDMKLE
VMEEKLLRDLTREIANLLSTMASPGLNPGLPVLEHSGPVGRIDVSSPKDLLAFKSNSMVG
YLLNHKNVALPALQFCLEVFTWTDGETTTKVCCFCGVVVLLTILTNNVELREFVSKDLFS
AVIRGLAMESNAVNSADLVNLCREIFIYLSDRDPAPRQVLLSLPCLTPNDLRAFEEAVGK
TPSPKEQKQLMRSLLLLGTGNNLRALAAQKTMNVITNVTLRTRGPASTSEAKEDEGETIG
LASVL
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgctagcaacaacaccaccgctagtaacgtcgcccaagcgattctcgccgtc
ctcgattacaactccactcccgatgctcgcagagctgccgttgcattcctcgaatccatt
aagtgtggagatatcagggttctagcacacgtgtccttatttcttgtgaagaaggaatgc
tcttcagaaatccgtctgcatgccttcaaaatgttacagcatctggttagactacggtgg
gaagaattaagcccctcagaacgcagggattttgctaaggtctctgttgacctaatgtca
gagattgctagtccatctgaggaatggtctctgaagagtcagtcagctgcccttgtagct
gagatagttagaagagaaggacccgatctttggcaggagttgtttccttcactaacttcc
ttatctgcacagggcccattacaagctgaagtggtctcaatgatgctcagatggcttcct
gaagatattacagttcacaatgaggacttggaaggagacaggcgtcggctgctgttgcgg
ggacttactcaatctttgcctgagattttacctttattgtataatcttctcgagagacac
tttggagctgcaatgaatgaagctagtaggctacacgctgacttagcaaaacagcacgcg
gctgtggtcatagcttgtttaaatgccatcaatgcatatgccgaatgggctcctgtttta
gatctttctagatacggaatcattaacgggtgcggtgcgttactttcctctcctgacttc
cgtcttcatgcttgtgattttttcaaacttgtctgctcaagaaaaagacccagtgatgtt
tttggtacggaatacgatgctgcgattagcagtctgtttcagagtctgatgaatgtctcc
agagaattcttatacagatcagcatcgtctggtgggggtatcgatgaaagtgattatgag
tttgctgagtgtatatgtgaaagcttggtttctttaggctcaacaaacctccaatgtatt
gccactgatggtggtgtactggctctctaccttcaacagatgcttggtttctttcaacac
tttaagttgggtcttcactttgaagcaatgctcttctggctggcattaatgagggattta
cttacaaagccaaaggctgccgctaatccaagtggagagggactagcaattggtggcatt
caaagttcaagccaagttgataacgaaaagaaaaagattttaggtcttattagtgatgac
atcgctagcacaatcctggatgtatctttccagcggatgctcaagaaagaaaaagtttct
ccacgaattgctccttctcttgggcctttagaactgtggagtgatgagttcgaaggaaag
ggagagtttggccaataccgatcaaggcttctagacttggtcaagtttgttacttctcac
aagcccctagttgccagtactaaaatatctgaaaggattatcaccctcattaaggatcta
ttggcttctccagtgcctcttcaggatgtggcagtgttggacagccagcaactggctttt
gattgtgttgtagcaacggtttttgatggatccaatgagtttgcaggtggtagttctgat
gttcatttttcattgcgtggaatatttgagggcttgctacagcagcttctctcattgaaa
ttgaccgagccagaacttataaaaatgcatgggcactatctggatgcaatgggtcccttt
ctcaagtatttcccagatgcagttggaaatgtgatcaacaaattgtttgaaatgcttacc
tctcttccgcacatggtcaaggatccagcaactagtacttcaagagtcgcaagattgcag
atttgcacgtcttttatacgtatagctaaaaccgctgataaaagtgttctgcctcacatg
aagtcgattgctgatagaatggcatatatgcaaagagagggaacgttactccgtggggag
cataacattctgggtgaagcatttcttgttatggcttctgcagcaggagctcaacagcag
caagaagttcttgcttggttgctggagccattgagccaacagtggatccagtcagagtgg
cagaattgctatctatcagaccctatgggtctcgttcgtttgtgctccaacacccccttc
atgtggtctttgttccacactgttacattctttgagaaggcactcaagagaagtggacat
agaaaaaccaacttgaatacgacctcagtaacaagtcaagatttgcatcctatggctcat
catctttcttggatgttgccacctctcctaaaacttctccgtgttatccattctctctgg
tctccgtcagtatatcaaacactacccccggagatgagggcagctatgacaatggctgat
gttgagcgatacagtctccttggggaagcaattcctaaattttcaaaagtctcctcggtt
tatgctgatggatcttttgatggtggtaaagaaggactaactgaggcaaacgaatctgat
gtgcgaaattggttgaaaggtatccgagatagcggatactgtgtgttgggtctatcagca
acaatcggagatacattcttcaaatgcctagatgctaactatgtcgcagtagcactcatg
gagaacttacagtcaatggagttcaggcacatgcgacagcttattcattcctttgtagtt
tatgtagtgaaatcttgtccggcagatatgtgggagtcatggcttgaagttctcctgcac
ccactatttattcattgtcagaaagctattagctcctcttgggccagtcttatgcgtgag
ggcagagcacaggttccagattcgtttggtgtacaaaatggaccggacatgaaacttgaa
gtaatggaagaaaaactgctgagggatctaactagggagattgccaacctcctttcaaca
atggcttctcctggtttaaatccagggcttcctgttttggagcattcaggccctgtggga
cgtattgacgtgtcttctcccaaggatttgcttgccttcaaatccaactctatggttggt
tacctcctgaatcacaaaaacgtggctctcccagctctgcaattctgtttggaagtattt
acatggacagatggggaaacaaccactaaagtctgttgcttttgtggtgtggttgttctt
ctaacgatcctgacaaacaacgttgagctcagagaatttgtgtcaaaagatttgttttct
gcggtcattagaggcttagccatggagtcaaatgccgttaacagtgctgatctagttaat
ctatgccgtgaaatatttatctatctctctgacagagacccagctccccgccaggttttg
ctttcacttccttgtctcacacccaacgacttgcgtgctttcgaagaagctgtggggaaa
actccaagtcccaaagaacagaagcaactcatgaggagtttgttgctgttaggtacaggg
aacaacttaagagcacttgctgctcaaaagaccatgaatgtcatcaccaacgtcacttta
aggacacgaggaccagcaagtacttccgaagctaaagaagacgaaggggaaacaatcggg
ctggcaagtgttttgtga
DBGET
integrated database retrieval system
