Raphanus sativus (radish): 108854807
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Entry
108854807 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase HOS1
KO
K16278
E3 ubiquitin-protein ligase HOS1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108854807
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108854807
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108854807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELYS
zf-C3HC4_3
Sec39
Motif
Other DBs
NCBI-GeneID:
108854807
NCBI-ProteinID:
XP_018483975
UniProt:
A0A6J0NHE2
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All DBs
Position
4:41001394..41006131
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AA seq
924 aa
AA seq
DB search
MDTNGYSSAARSINLPDYTSKPVQEALMHLASINLRDLCNEAKVERCRATRDLTSCGRSV
HHALNPCGHASLCAECCQRFDLCPICRSQLLPSRTGDRLRLRLYYECVQAGLISSPTHED
EDEDEHADVHRLYSLFDVAMNNNLVSVVCLYITNVCMDEAAVSSDPVIAFLLDEVVVKDW
VKRTFRTILAELQEIYRLETKEMQAWLDKLLKSSKQVAGVCSVLEVMESAFKGSVSPQLQ
DVQKLKENIGKTKQHLEIMIWCIRHGFLEDVRSRYSDFRSWKALVLERKSNAIKRAWPDA
VDQSSDCSVHGGSLFIEDALENLEREPEYSQDIGADLEVGCLQNDNRSVLRSKIEGMSGS
YPFENIRTAADILFLQGSSDLVVAKQAIFLYYLFDRHWTTPEKHWKHIIDDFAATFGITR
HSLLESSVFYLLDDPSEEALQEACRTLPEICGPETYTKVAQVLLERETPEAALMVLRLSG
RDGVSELVSVGEAVTAVRVRVECGLLSEAFTHQRALCLKVKENELKNGAVKHASDDRDSL
SWTRWMEILVNEFCCLSIRRNVVDRIIELPWNPDEEKYLHRCLLDSATDDPSSAVGSLLV
VFYLQRYRYIQAYQVDLRLQGIEEAFLSENRIGEEVMSRMQSQSHWRKELVDKAIDILPA
IQQQQVRSGQFPPEMEDTSESASEAAKSTDLPDGQQQPGMISSTNSVFLQRAKDAGAREP
VAANNGSSPFQPSRLIGSASVDISRGKLFTSANRGQKSEVGSITKALKFGEVSTTPFKDL
NRTRGNSQLKGKRTEETSPGINFDRFTENSMSSPYLTANSPVAMKRSTTHLNGSAKKPES
TFFGGRMRPDGEHPTQWDDPMDMSSSLKNNSNVLTTESRNTSGGLRWRSDEASDEEDEPK
WTMEPTISGSLPGKGRRTRRFAAR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggacacgaacggctattcctccgccgctagatcgataaatcttcccgattacactagc
aaacctgttcaggaggcgttaatgcacttggcatccataaacctcagagatctctgtaac
gaggccaaggtcgagcgttgccgcgccaccagagacctgacgagctgtgggagatccgtt
caccatgcgttgaacccgtgtggacatgcttccctgtgcgcagagtgttgccagaggttt
gatctttgtccaatctgtagaagtcagctgctaccatcaagaactggtgatagacttcgt
ctccgtctctactatgagtgtgttcaagctggtttaatctcctcaccaacacatgaagat
gaggatgaggatgaacatgctgatgttcatcgcctttattctctcttcgatgtggccatg
aacaacaatttggtgtctgtggtttgcctttatatcaccaatgtgtgtatggatgaggca
gctgtatctagtgacccggtcattgctttcttgctggatgaagttgttgtcaaagattgg
gtcaagcgtacattccggaccatcttagctgagcttcaagaaatctatcggcttgagacg
aaagagatgcaagcgtggttagataagctattgaagagttcaaaacaagtggctggcgta
tgtagtgtgcttgaagttatggagtcggcttttaagggctctgtttcacctcagcttcaa
gacgtgcagaagcttaaggagaacattggaaaaacaaagcagcatctggaaattatgatc
tggtgcataagacacggatttctggaagatgtgaggtctcggtattctgatttcagatcg
tggaaggctctggtgcttgaaaggaaatcaaatgcaattaagcgtgcatggcctgatgcc
gtagatcagtcttcagattgcagtgtacatggtggttcccttttcatcgaggatgctttg
gaaaatctcgagagagagccagagtacagtcaagacataggggcagatctagaagttgga
tgtttgcagaacgataatagatcagttcttaggtccaaaatagagggaatgtcaggatct
tacccatttgagaatattagaactgctgctgacatactctttttacagggcagctcagat
ttggttgttgctaagcaagccatttttctttattacctgtttgatcggcattggactacc
cctgaaaaacattggaagcacatcatagatgattttgctgctacctttggcataaccagg
cattccttgttggagtcttctgtattttatctactagatgatccctcagaggaggcactc
caggaagcttgtaggactctccctgaaatatgtggtccagaaacatataccaaggttgca
caagtcttgttagaaagggaaacccctgaagcagctcttatggtcttgcgcttgtctggt
cgtgatggcgtatcagaattggtttcagttggtgaagctgtcacagctgttcgtgtgaga
gtggaatgtggtcttttgagtgaagcattcacgcaccaaagggcactctgcctgaaagtg
aaggaaaatgagctgaaaaatggagctgtgaaacatgcgtctgatgatcgagacagcttg
agttggacgagatggatggagatacttgttaacgaattttgctgtctgtctattaggaga
aacgtggttgatcgaataatagagttaccgtggaacccagatgaagagaaatatctgcac
cgatgcttattagattctgcaactgatgacccctcatcagctgtgggtagtcttttggtt
gtcttctatcttcagcgctaccgttacatccaggcgtaccaagtcgatcttaggctccag
ggaattgaagaggctttcttatctgaaaatcgaattggggaagaagtaatgtccagaatg
caatcacagagtcactggaggaaagagttagttgataaagccatagatatacttccagca
attcagcagcagcaagtcagatctggacaatttcctccagagatggaagatacctctgaa
agtgcttcagaagcagcaaaaagcactgatctacctgatggacaacaacagcctgggatg
atttcttctactaactccgtatttctacaacgggctaaggacgctggcgctagagagcca
gtggcggctaataacggcagcagtccttttcaacccagtcgtttgataggatccgcttcc
gttgatatttcccgtggaaaactatttacaagcgcaaacagaggtcagaagagtgaagtt
ggaagcataaccaaggctctgaaattcggcgaagtgtccacaacaccgttcaaagatctg
aacagaactcgtggaaacagccagctcaagggaaaaagaactgaagaaacatctccagga
ataaactttgatagattcacggagaatagcatgagctctccttatctcacagctaatagt
cctgtcgcaatgaaacgaagcaccacgcatctcaatggatctgcaaagaaaccggaatcc
actttctttggcggaaggatgcgaccagacggagaacacccgacccaatgggatgatcca
atggacatgtcttcaagtttgaagaacaacagcaatgtcttgaccacggagagcagaaat
acaagtggcggattgaggtggcgatcagatgaagcaagcgatgaggaagatgaacccaag
tggaccatggaaccgactatttccggttccctgccgggtaaaggaaggaggacccgtaga
ttcgctgcaagatga
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