Raphanus sativus (radish): 108854828
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Entry
108854828 CDS
T06014
Name
(RefSeq) ABC transporter B family member 9
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108854828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108854828
04147 Exosome [BR:
rsz04147
]
108854828
04090 CD molecules [BR:
rsz04090
]
108854828
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108854828
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108854828
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108854828
CD molecules [BR:
rsz04090
]
Proteins
108854828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
Zeta_toxin
AAA_16
AAA_15
RsgA_GTPase
AAA_21
AAA_30
DUF87
G-alpha
AAA
AAA_24
DUF815
DLIC
RseC_MucC
Motif
Other DBs
NCBI-GeneID:
108854828
NCBI-ProteinID:
XP_018483998
UniProt:
A0A6J0NJQ7
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MKKEEERDETMKKNGGENQKVSFFKLFSFADRTDVALMTIGTISAVANGVTQPLMTLIFG
QLINAFGTTDPDHMVKEVWKVAVQFIYLAVYSCIVAFLQVSCWMVTGERQSATIRGLYLK
TILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFLQLVATFLGGFAIAFIKGW
RLAVVLLGCIPLVVVAGGAMASIMSKMAGRGQVAYADAGNVVEQTVGAIRTVVAFTGEKQ
ATEKYESKLEIAYKTMVTQGLISGLGLGTMLAAIFCSYSLAVWYGAKLIIGKGYNGGQVI
NVIFAVLTGGMSLGQASPSMNAFGAGRAAAYKMFETIQRSPKIDAYDMSGSVLEDIKGDI
ELRDVYFRYPARPDVQIFAGFSLFVPNGTTMALVGQSGSGKSTVISLIERFYDPESGEVL
IDNVDLKKLQLKWIRSKIGLVSQEPVLFATTIKENIAYGKEDATNEEIRTAIELANAAKF
IDKLPQGLDTMVGEHGTQMSGGQKQRLAIARAILKNPKILLLDEATSALDAESERIVQDA
LVNLMSNRTTVVVAHRLTTIKTADTIAVVHHGKIVEKGTHDEMIQDPEGAYSQLVRLQEG
SKEKATESEIPETSSGLERSGSNRLSSAMRRSVSRDSSSSRHSFSLTSNFFIPAAVNVNE
ADENEQETRTVRHKKVSLTRLAHLNKPELPVLILGSFAAMVHGTLFPIFGLLLSSSINMF
YYPAEKLKKDSRFWALIYIALGVANFVVIPVQNYLFGIAGGKLIKRIRSMSFDKVVHQEI
SWFDDTANSSGAIGARLSTDATTVRSLVGDALALIVQNIATVTAGLIIAFTANWMLALVV
LAVSPFLVMQGYVQTKFLTGFSADAKIMYEEASQVANDAVSSIRTIASFCAEDKVMDLYQ
QKCDGPKKQGVRLGLISGAGFGSSFFILYCTNALCFFIGALLVQQGRATFGEVFKVFFAL
TITAIGVSQTSALAPDSNKAKDSAASIFDILDSKPKIDSSSDEGTTLQNVKGDIEFRHVS
FRYPMRPDVQIFRDLCLNIPSGKTVALVGESGSGKSTVISMIERFYNPDSGMILIDQVEI
QTLKLSWLRQQMGLVSQEPVLFNETIRSNIAYGKTGGATEEEIISAAQAANAHNFISSLP
QGYETSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVVQDALDRVM
VNRTTVVVAHRLTTIKNADVIAVVKNGVIAEKGRHETLMKISGGAYASLVTLHMTSS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaagaggagagagacgaaacaatgaagaagaatggtggggagaatcagaaa
gtgtcgtttttcaaactcttttcgttcgcggacagaactgacgtcgctttgatgaccatc
gggactatctccgccgtggctaacggcgttactcagccgctcatgactctaatctttggc
cagctcatcaacgcctttggcaccaccgacccagatcacatggttaaagaagtgtggaag
gttgctgtacagtttatttaccttgcagtatactcttgcatcgtcgccttcctccaggtg
tcatgctggatggtaactggagaacgtcaatccgctacaattcgtggtctatacctgaaa
acgatactaagacaagacattggcttctttgatacggagacaaccaccggagaagtcatc
gggagaatgtctggagacactattctgattcaagaggcaatgggagagaaggttggcaag
tttctacaactagtagcaacgttcttgggaggatttgcgattgcatttataaaagggtgg
agactagcggtcgttcttcttggttgcatacctctggttgtggttgctggtggtgcaatg
gcttccatcatgtctaaaatggctggtcgtggtcaagtggcctatgcagatgctggaaac
gttgttgaacaaaccgttggagccattagaacagtagtagcgtttacgggagagaaacaa
gcaaccgaaaaatacgaaagcaagctcgagatcgcttacaagacaatggttacacaaggt
ttgatctctggtctaggtctcggtacaatgctagccgcgatcttctgtagctacagttta
gcagtttggtatggggcaaagctaatcatagggaaaggctacaatggtggacaagtcatc
aacgtgatcttcgccgtccttaccggaggaatgtcgttagggcaagcatctcctagtatg
aatgcattcggtgcaggacgagctgctgcttacaaaatgtttgaaacgatacagagaagc
cccaagatcgatgcttacgacatgagcggttctgttctcgaggatattaaaggagacatt
gagctgagagatgtttactttaggtatcccgctagacccgacgttcaaatcttcgctgga
ttctcgctctttgtaccgaatggcacgaccatggctcttgtgggacagagcgggagcggg
aagtctaccgtcatctctctaatcgagaggttctatgatccagaatcaggagaagtgttg
atagacaatgttgacttgaagaagcttcagctcaaatggattagaagcaaaataggtttg
gttagccaggagcctgttctgttcgcgaccaccattaaggagaacattgcttacgggaaa
gaagacgctactaatgaggagattcgaaccgctatcgagcttgccaacgctgccaagttc
attgacaagctcccacagggcttggacacgatggtaggagagcacgggacgcaaatgtct
ggaggacagaaacagaggctagcaatagctagggcgattttgaaaaaccctaagatcttg
cttctagatgaagcaacaagtgcattagacgctgaatccgaacgcattgtccaagacgcg
ctcgtgaaccttatgtcgaaccggacaaccgtcgtggtcgctcaccggttgacaacaata
aaaaccgcggacacaattgcagttgttcaccatggcaaaatcgtcgaaaaagggactcac
gatgagatgatacaagatccagaaggagcttattcacagctggttcgtcttcaagaaggc
tcaaaagagaaagctaccgaatcagagatacctgaaacgagctcaggccttgagagatca
ggaagcaacaggctgtcatcagcgatgagaagatcggttagccgagactcgtcgagcagc
cgccactctttctctctgacttcaaacttcttcataccagcagcggttaacgttaacgag
gcggatgaaaacgagcaggagacacgaaccgtgaggcacaagaaagtatcactgacacgt
ctagctcacctcaacaaaccggagcttccggttctgattctcggttcgtttgctgcaatg
gttcacggaacgttgttccccatcttcggtttgctgctttcgagctccatcaacatgttc
tactacccagcagagaaactaaagaaagattcacgtttctgggcgttgatctacatcgct
ctcggtgtagccaacttcgtcgtgatcccggttcaaaactacttgtttggtattgctgga
gggaagctgattaaacgcattagatccatgtcgtttgataaagtggttcatcaagaaatc
agctggttcgatgacacagcaaactccagcggtgcgattggagcgagattgtccacggat
gccacaacagttaggagtttggtgggcgatgcgttggcgttgattgtgcaaaacatagca
actgtaaccgccggtttgataatagcctttactgcgaactggatgctagctcttgtagtt
cttgccgtctcaccgtttctcgtcatgcaaggatatgttcaaaccaagttcctgaccggt
tttagcgcggacgctaagattatgtatgaagaagcgagccaagtggcgaatgatgcagtg
agcagcataagaacgattgcatctttctgcgctgaggacaaggtgatggatttataccaa
cagaaatgtgacggaccaaagaagcaaggtgtccggttaggtctcatcagcggtgccggt
ttcggttcctctttctttattctctattgcaccaatgctttgtgtttcttcatcggtgcc
ttgttggttcaacaaggtagagccacattcggtgaagtcttcaaggttttctttgcactg
acgatcacagcaattggagtttctcaaacgagcgctttggcacctgattcaaacaaggct
aaggactctgcggcgtcgatttttgatattcttgatagtaaaccgaagatcgattccagc
tctgatgaaggtacaacgttacaaaacgttaagggggatattgaattccgacatgttagt
ttccggtacccgatgcgaccggacgttcagattttccgggacttgtgtttgaatatacct
tccggcaagactgttgcgcttgttggagagagcgggagcgggaaatcaacggtaataagc
atgatcgagaggttttacaatccggactcaggcatgattctgatcgatcaggtggagatt
cagacattgaaactgagctggttaagacaacagatgggtttggttagtcaagaaccggtt
ctgttcaacgagacgatcagatcgaacatagcttacggtaaaaccggcggagccacagag
gaagagatcatctcagccgcacaagccgcgaacgcgcataacttcatcagctcgttgcct
caaggctacgaaacgtcggttggagaacgcggcgttcagctatcaggcggtcagaagcag
aggatagcgatcgcgcgggccatcttgaaagatcccaagattctgctgctcgacgaagcg
acgagcgcgctggacgcggagtctgagcgcgtggtgcaagacgcgctagaccgtgttatg
gtgaacaggacgactgtggttgtggcgcataggctgacgacgatcaagaacgcagacgtg
atcgcggtagtgaagaatggtgtcattgcggagaagggaaggcatgagacgctgatgaag
atttcaggtggtgcttatgcttctcttgttactctccacatgacttcaagttaa
DBGET
integrated database retrieval system
