Raphanus sativus (radish): 108854896
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Entry
108854896 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase ATL41-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108854896
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108854896
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108854896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
108854896
NCBI-ProteinID:
XP_018484079
UniProt:
A0A6J0NHR3
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All DBs
Position
4:42027345..42028244
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AA seq
225 aa
AA seq
DB search
MSSNDRDHTWPNGNDHHWFWPDPSHYDPTSMIMLAAVISSSAVIFIIFAFYIYARFVLHR
RREASFRGLPVVLHHPFQTPKRGLHATVIASLPSFTVGAISDVAAATECAVCLSVFEEQD
TARELPNCRHVFHVDCVDTWLTTCSTCPVCRSEVQPRLRLEPEPREGIIGDGASPLTTPP
SLEEVRLNSSSVSRLDSFRRILTRERSSNRINHSCVDQDHVVDGT
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaacgacagagatcatacatggcctaacggtaacgaccaccactggttctgg
ccagacccttctcattacgatcccaccagcatgatcatgctcgcagcagtcatatcatca
tcagcagttatcttcattatcttcgctttttatatctacgcaagattcgttctccatcgc
cgtagagaagctagcttccgtggcctcccagtcgtactacaccacccttttcagacgcca
aaacgtggcctccacgcaacagtcatcgcttctctcccctctttcaccgttggagccata
agtgacgttgcggccgctactgaatgtgcggtgtgtcttagcgtgtttgaggagcaagac
acggcgagagagttgccgaactgtagacatgttttccatgttgactgtgttgacacgtgg
ctcacaacttgctctacttgtcctgtttgtcggagtgaagttcagccaaggctgagactt
gagcctgagccacgagaaggaataattggggacggtgcctcaccattgactactccaccg
tcgttggaagaagttaggttgaactcttcgtcggtctcacgactagactcgtttaggaga
atattgactagagaaagatcttcaaacaggatcaaccattcctgcgttgaccaagatcat
gtagtggatggaacttga
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