KEGG   Raphanus sativus (radish): 108854937
Entry
108854937         CDS       T06014                                 
Name
(RefSeq) lysine-specific demethylase JMJ28-like isoform X2
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rsz03036]
    108854937
Enzymes [BR:rsz01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     108854937
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108854937
SSDB
Motif
Pfam: WRC JmjC
Other DBs
NCBI-GeneID: 108854937
NCBI-ProteinID: XP_018484115
UniProt: A0A9W3DN65 A0A6J0NHT1
LinkDB
Position
4:6161574..6165808
AA seq 935 aa
MSETEAVPDEFRCNRSDGKQWRCKRRALEGKKMCETHTSQLTLKRSKQKKAAASAESTRS
RRGDEASEMERRSKKKRKREVGEAEAVDEAVKKMDLKRGDLQLDLIRMALKREAEKKKKA
PKKKKKKKRKEISVNKHFVGEELTKVLPYGIMAISPPSPTTSNVSSPSPSPSPCDVKVGE
EPVSLTKRRFRSKNIEPLPFGKMQVVPFKGKLVKAKRRCHWCGTRGFEDLISCLSCEREF
FCVDCIEKRNKGSKEEVEKKCPVCCGSCRCKACSASVSGVTECKDSRNVRSGIDRVLHLH
YAVCMLLPVLKEINAEDRAEVENNTAEKKGKNLAELQIDSSDLTSDDQQLCSRDSAVVDS
QKMCTRSSSVLRLSADQDRSQRSLSKKFGLVKCLNGVECCKHPLANACDQSLNKALVDCK
REEVKSCRNDLSMRSLFSLEFTSKLETSAEEIVSCYELPETLDKHLRCPFCLGREKPSSS
SRLKEASRRRGDSTDNFLYYPTVMDFQQNNLEHFQTHWSKGHPVIVRSVLKGGSNLNWDP
IALFCSYLKKSNSKTGNAADGVDWFEVDIGVKQVFLGSLRGGEAETNTCQERLKLEGWLS
SSLFKEEFPNHYAEILRSLPIPYYMDPKRGILNIAAGLPDVIQAPNLGPCLNISYRSGEE
YAKFDFVKKLGFETCDMVDILLHVTETVVSTKQICRIRKLMQNIGRVRSKNPEKRKESRG
KKHDRIDTSYAQRDWSDDSCSSDSESSQHRLGSGEFKVEERESCNDSCEEGSLSNSCGAQ
WDVFQIQDVSKLLEYIKNHCLELVPTDSSKEQVCHPLLEQSYYLDEYHKARLKEEFDVEP
WSFDQCVGEAVIVPAGCPYQNRKNKSCVNAVVNFLSPEHVTESIKRVDELNQLPQNVKTN
ANKIEVKKMAIYKVSEAIKEIRELTSSDSTAASRL
NT seq 2808 nt   +upstreamnt  +downstreamnt
atgtcggagaccgaggctgtacccgacgagtttcgttgcaacaggtcggacgggaagcaa
tggcggtgcaagagacgggctttggaagggaagaagatgtgcgagactcatacctcgcag
ctcactctgaagcggagcaagcagaagaaggctgctgcttctgctgagtcgacgagatca
aggagaggagacgaagcgtcagagatggagcggagatcgaagaagaagaggaagagagag
gtgggagaagcagaggctgttgatgaagctgtgaagaagatggatttgaagagaggggat
ttgcagttggatttgataaggatggcgttgaagagagaagctgagaagaagaagaaagca
ccaaagaagaagaagaagaagaagaggaaggagattagtgttaataaacatttcgttggg
gaggagttaacgaaggttcttccttatggcattatggctatttctccaccttctccgact
acaagcaatgtgtcatctccttctccttctccttcgccttgtgatgttaaagtaggtgaa
gaacctgtttctttgactaagagaagattcaggtctaagaatattgagcctttacctttt
gggaagatgcaggtggttcctttcaagggaaaattggttaaggccaagaggaggtgccat
tggtgtggaaccagaggatttgaggacttgattagctgtttgagttgtgaaagggagttc
ttttgcgttgactgtatagagaaaaggaacaagggatcaaaagaagaagttgagaaaaaa
tgccctgtatgctgtggatcatgtaggtgcaaggcttgctcagcctctgtgtctggagtc
actgaatgtaaggattctcggaatgtgaggagtggtattgacagggttttgcatctacac
tatgctgtctgcatgcttcttcctgtattaaaagaaatcaatgcagaagacagagcagag
gtcgaaaacaacaccgcagaaaagaaagggaaaaatctagctgaactgcaaatcgatagc
tctgacttaacctctgatgatcaacagctctgcagtcgtgactctgctgttgtggattca
caaaaaatgtgcacccgaagctcctctgtcctcaggctgagtgctgatcaagacaggagt
caaaggagcttatctaaaaagtttggtttagtcaaatgcttgaatggtgtagaatgttgt
aagcaccccttagctaatgcctgcgaccaatctctaaataaagctctggtagattgtaag
cgcgaagaggtcaaaagttgcagaaatgacctttctatgaggagtctattctctctggag
tttacaagcaagttagagaccagtgcagaggaaatagtcagttgctatgagttgcctgaa
accttagataaacacttgcgatgtccgttttgtcttggaagggaaaaaccatctagtagc
agccgtttgaaagaagcatccaggagaagaggagactcaactgataacttcttatactac
cccacagtgatggattttcaacagaacaatctcgaacactttcagacacactggagcaaa
gggcatcctgttatagttcgcagtgtgctaaagggaggttcaaacctgaactgggatcca
atagccttgttttgtagctatcttaagaagagcaatagcaaaaccggtaatgcagccgat
ggcgtggattggtttgaggtggacattggggtgaaacaagtatttttggggtctttgaga
ggaggagaggctgagactaatacttgtcaagagaggctgaaattggagggatggctttcg
tcttctttgtttaaagaagagttcccaaatcattatgctgaaatcctgagaagtttacca
attccttattacatggatcctaagcgtggtatactaaatatcgctgctggtttacctgat
gttatccaagctcccaacctaggtccatgcctcaatatctcttacaggagtggtgaagaa
tatgcaaagtttgattttgtgaagaagttaggttttgaaacttgtgacatggttgatatc
ttgttgcatgtcacagaaacagtagtgtcaacaaagcagatttgcagaataagaaagcta
atgcaaaatattggaagagtaagatctaaaaacccagaaaagaggaaggagagtagggga
aagaaacatgataggattgacacttcatatgctcagagggattggtcggatgactcttgc
agttctgattcagaatcttcacaacaccgtttaggcagtggtgagtttaaggtagaggaa
agagagagttgcaacgactcatgtgaagaaggaagcctaagcaactcttgtggtgcccaa
tgggatgtattccagatacaagatgtttctaaacttcttgagtatattaagaaccactgt
ctggagctagtgcccacggattccagcaaagaacaagtgtgtcatccattacttgaacag
agttactatcttgatgagtatcacaaagcaaggcttaaggaagagtttgatgttgaacca
tggagttttgatcaatgtgttggggaagcagtcatcgtgcctgctggatgtccataccaa
aatagaaagaacaagtcttgcgtgaatgcggtcgtgaattttctttcacctgaacacgtt
actgaatctataaaacgagtggacgagcttaatcaactccctcagaacgtcaaaacgaat
gcaaacaagattgaggtgaagaaaatggctatctataaagtcagcgaagctataaaggag
atccgggagctcacatcttctgattcaaccgctgcatcgaggttataa

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