Raphanus sativus (radish): 108855104
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Entry
108855104 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108855104 isoform X1
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
108855104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108855104
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
108855104
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PGAP1
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Palm_thioest
DUF676
Motif
Other DBs
NCBI-GeneID:
108855104
NCBI-ProteinID:
XP_056864805
UniProt:
A0A9W3DLX6
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Position
4:complement(13241310..13247934)
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AA seq
1087 aa
AA seq
DB search
MRGVRFGMSSSQGVRPRLRIVGVVILAAWIGLAALFGLLKPIKNGCTMTYMYPTYIPISV
TDGSTPPGRYGLYLYHEGWRKIDFKEHVSKLSGVPVLFIPGNAGSYKQVRSVAAESDRAF
QGGPFERTFYQEASLFRGEGEDTESVEYDLSSQYTNRLDWFAVDLEGEHSAMDGRILEEH
TEYVVYAIHRILDQYKESHDTREREGAAASSTLPRSVILVGHSMGGFVARAAAVHPRLRK
SAVQTILTLSSPHQSPPLALQPSLGHYFARVNQEWKKGYEVQTSPGGSYVSDPLLSGVVV
VSIAGGYNDYQVRSKLESLDGIVPASHGFMISSTSMKNVWLSMEHQAILWCNQLVVQVSH
TLLSLVDSKTGQPFSGTQERLWIFTRMLQSALAQSFNGVTPMKISNELPMVASKGSESQI
SCPLNWRDDALDRDLYIQTSTVTILAMDGRRRWLDIELLGSNGKNHFIFVTNLAPCSGVR
LHLWPEKEKSNSDLPVCERVVEVTSKMVLIPAGPAPKQSEPGSQTEQAPPSAVLKLEPED
MHGFRFLTISVAPREAVSGRPPVAVSMAVGQFFNPKEGVMEVSSQSMLLSAYWAKEIFLK
EDHPLAYNLSFAISLGLLPITLSLKTAGCGIKTFGLPDGETGDLDKDKLCKLRCFPPVAL
AWDSASGLHVYPNLYSETITIDSSPALWSSQSPEKTTVMLLVDPHCSYTASVHVSAPAMS
SRFVLLYGPQIVGFSFAVIVYALMRQANQWDQNLSVPPLLSAVEYNLEMPTPFLILAAIP
LLSSLFFSFVMAQPIPPLTSFTMVSLICYLLANAFISVLIIVSKLVLQALALVHTTVKSR
FSFAFLRWFSILASSFVGLKAIRILKLNTTIVMTLVAVTLVTFVHPALGLFVLLASHALC
CHNSMCCIMMASKRKESVDQKNEAERKTRSRQESLSVDLSEKSFVETQADIFNHVHGLLI
LHLLAALMFVPSLAAWFQRIGTGQSFPWFADSALCVGVIFHGVLNSRPESSSLRSFPSLL
GHQLGPHHMYFLAGYCCFFSGLDLAPYKVFYAIAALGYISLALKISQKDSALGSSPPQSN
DPARKAR
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtgtaagatttggtatgagcagcagtcaaggcgttcgaccaaggctgaggata
gttggcgttgtgattttagctgcatggattgggcttgcggctttgtttggtctgctaaaa
cctataaagaacggttgtactatgacttacatgtatcctacttacatccctatctctgtg
accgacggttcaactcctcctgggagatatgggctctatctttaccatgaaggatggagg
aagattgattttaaggaacacgtcagtaaacttagcggagttccagttcttttcattccg
ggcaacgccggtagctacaagcaggtcaggtctgtggcagcagaatctgatagagcattc
cagggaggccccttcgagcgcacattctaccaggaagcttctctgttccgtggggaagga
gaagatacagagtctgtagaatacgatttgtctagtcagtacactaacagacttgattgg
tttgcggtggatcttgaaggtgaacattctgcaatggatggtcgcatacttgaggagcac
actgaatatgtcgtatatgccattcataggatcttagatcaatataaagaatctcatgat
accagagaaagagaaggtgctgctgcctccagtaccttacctcgtagtgtaatattggtt
ggccactctatgggtggttttgttgccagagctgctgcagtccatcctcgtttgcggaaa
tcagctgtgcaaaccattctaacactctcaagtccgcaccaatcacctcctctggcattg
cagccatccttggggcattactttgctcgagtgaaccaagaatggaaaaaagggtatgaa
gtacaaacatccccgggaggaagctacgtatctgacccattactttcgggagttgttgtt
gtatccattgctggtggctacaatgattatcaggtgcgatcaaagttagagtcacttgat
ggcattgtccctgcaagtcacggctttatgataagcagtacaagcatgaaaaatgtgtgg
ctgtcaatggaacatcaagctattctgtggtgtaatcaactggttgttcaagtttcacat
acgcttcttagtttggtggactcaaaaactggtcagccattttccggtactcaggagagg
ctttggatttttaccagaatgcttcaaagtgcattagcacaaagcttcaatggagtgaca
cctatgaaaatttctaatgagttgcccatggtagcctcaaagggctctgaatcacaaatt
tcatgtcccctcaattggagggatgatgctcttgatagggatctgtacatacaaacaagt
actgttacaattttggcaatggacgggagaaggcgttggttggacatagaattgttggga
tcaaatggaaaaaaccactttatctttgttacaaatctggcgccttgttctggagtaaga
ctccatctatggcctgagaaggagaaatcaaattcagatttaccggtttgtgaaagggtt
gtcgaagttacgtcaaagatggttctcattccagcaggccctgcaccaaaacagtccgag
ccagggagtcaaaccgagcaagctcccccatctgcagtgctgaagctagagcctgaagac
atgcacggattcagattcttgactatctcagttgcgcctcgcgaagcagtatccggtaga
cctcctgtggcggtttctatggcagtggggcagttctttaaccctaaagaaggggtcatg
gaggtctcatctcagtcaatgctcttatccgcttactgggcaaaggaaatatttctgaag
gaggaccatcctttagcttacaatctatcgtttgctatcagcttaggtctactgcccata
acactgtccctgaaaactgctggatgtggaattaaaacttttggtctaccagatggcgag
acaggagacttggacaaggataagctttgcaaattgcgttgcttcccacctgttgccctt
gcctgggattctgcttctggacttcatgtgtatccaaatctctacagtgagacgataact
attgattcttcaccagctctttggagttctcagagtcctgagaaaactactgttatgtta
ctggttgaccctcattgctcatacaccgcaagcgttcatgtctctgctcctgccatgtcc
agcagatttgtacttctatatggtcctcagatagttggcttctcgtttgccgttatagtg
tatgctcttatgcggcaagctaatcagtgggaccaaaatttatctgtgccaccattgctc
tctgctgtagagtacaacttggaaatgccaaccccgtttctgattctagctgcaatccct
cttctgagttcgttgttcttctccttcgtaatggcccaaccgattcctcccctcacaagc
ttcacaatggtctcgttgatatgctatttgttagccaatgccttcatcagtgtgttaatt
attgtctccaaacttgtcttacaagcgttggccctcgtccacaccactgttaaatctagg
ttttcttttgcttttcttcgttggttttctatacttgcttccagtttcgtcggtttaaag
gcaatccgaattctgaagctcaacactacaattgtaatgacactagtcgcggttaccttg
gtgacctttgttcatccggctttgggtctttttgtactcctcgcctctcatgccctttgc
tgccataactcaatgtgctgtatcatgatggcatcaaagagaaaggagtctgtcgatcag
aaaaatgaagccgagcgtaaaactcgaagcagacaggaatctttatcagtagacttgtct
gaaaaatcatttgtggagacccaagcagacatcttcaaccacgtgcacggcctactaata
ttgcatctccttgcggctttgatgtttgtaccctctcttgccgcttggttccagcggatt
ggaacgggacaaagcttcccttggtttgctgactcggctctctgtgttggcgttatcttc
cacggagtactgaactcgagaccagagtcaagcagcctacgttctttcccatctctcttg
ggacaccaactcggtccccatcacatgtatttccttgccggctactgctgcttcttctct
ggactagacttggccccatacaaagttttctacgccatagctgcgttaggctacatctcc
ttggctcttaagatctcacagaaagattcagctctcgggtcttcaccgccccaaagcaac
gacccagctcgaaaggccaggtag
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