Raphanus sativus (radish): 108855194
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Entry
108855194 CDS
T06014
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108855194
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108855194
BRITE hierarchy
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108855194
NCBI-ProteinID:
XP_018484448
UniProt:
A0A6J0NL00
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Position
4:complement(14982866..14989725)
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AA seq
589 aa
AA seq
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MAASSSSAASFFGVRQDEQSHLLPLNSSAAVPAPPHHQPPQPQQPLEAPPQKKKRNQPRT
PNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRK
VYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCG
TKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYGQNTNNSNNNT
SSMILGLPHMGAPQNLDHQSGDVLRLGSGGGGGGGASRSSSDLIAANASGYFMQEQNPSF
HDQQDHHQHQQQGFLAANSNIKPSTMNFQQSLMQFSNDNHNSPSSNLFNLSFLSGNNGVA
SATSNPNAAAVSSGNHMISNHFGGENAVGGSGGGSTGLFPNNLMSSAGRINSGAVPSLFS
SSMQNPNSAPHMSATALLQKAAQMGSTSSSSNNNNTNNASSILRSFGSGMYGENESNLHD
LMNSFSNPGATGNNLNAVDSQFGTYGGVNKGLSADKQNMTRDFLGVGQIVRSMSGSAGFQ
QQQQQQHGNGGKERVGSSSDSADRNSMNVNPGGGGSTSSPSYGIHHASF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttcttcttcctctgctgcttccttctttggagttcgacaagatgaacagtct
cacctgcttcctcttaattcctccgcagccgttcctgctcctcctcaccaccagccaccg
cagcctcagcaaccccttgaagctccaccgcagaaaaagaaaagaaaccaaccaagaact
ccaaattcagatgcagaagtgatagctttatctccaaagacactaatggctacaaataga
ttcatatgtgaagtatgcaacaaagggtttcaaagagaacagaatctacagctacaccga
agaggacacaatcttccatggaaacttaagcaaaaatcgaccaaagaagtgaagaggaag
gtgtatctttgtccggaaccctcgtgcgtccaccatgacccgtcacgtgctctcggagac
ctcaccggaatcaagaaacattattaccgtaaacacggtgaaaagaagtggaaatgcgag
aaatgttctaagcgttacgctgttcaatctgattggaaagctcactccaagacttgtggt
accaaagaatatcgttgcgattgtggtacactcttctcccggcgagacagtttcattacg
catagagccttctgtgacgcattggctcaagaaagtgcgagacacccaacttctttgaca
tctttgccaagtcaccactttccctacggacaaaacaccaacaactccaacaacaacact
tcaagcatgatccttggtttgccccatatgggggccccacagaatcttgatcatcagtcc
ggtgacgttcttcgacttggaagcggcggaggaggtggagggggcgcctcgcgatcttcc
tctgatctcattgctgcaaatgcttcaggttacttcatgcaagagcaaaaccctagcttt
catgatcagcaagaccatcatcaacatcaacaacaagggtttttggctgcaaacagtaac
atcaagccatctacaatgaattttcaacagagtctgatgcagttctcaaatgataaccat
aattctccttcctccaatctcttcaatctaagctttctatctggaaacaatggagttgct
tctgctacaagcaacccaaatgctgctgctgtttcttcgggtaatcatatgatttcaaac
cattttggtggtgaaaatgctgttggaggcagcggaggaggaagtactggtctcttccct
aacaatctgatgagttcagcaggcagaatcaactcaggagcagtgccttcactctttagc
tcgtcaatgcaaaaccctaattcagcgcctcacatgtcagccactgctcttcttcagaaa
gctgctcaaatgggttcaacctcaagcagcagcaacaacaacaatacaaacaatgcctcg
tcgattctaagaagctttgggagtggaatgtacggagaaaacgagagtaatcttcacgat
ttgatgaactctttctctaacccgggcgcaactggaaacaaccttaatgcagtagattct
cagtttgggacgtacggtggagtgaacaaaggactaagcgctgataaacagaacatgact
agagactttcttggagttggacagattgtaagaagcatgagtggaagcgcagggtttcaa
caacaacagcagcagcagcatgggaatggtggtaaagaaagagttggctcttcctctgat
tccgccgacagaaacagcatgaacgtgaatcctggtggtggtggttctacaagttcacca
tcgtatggaatccatcatgctagtttctag
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