Raphanus sativus (radish): 108855242
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Entry
108855242 CDS
T06014
Name
(RefSeq) myosin-16 isoform X1
KO
K10357
myosin V
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108855242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108855242
04131 Membrane trafficking [BR:
rsz04131
]
108855242
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108855242
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
108855242
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108855242
mRNA cycle factors
P-body specific factors
108855242
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Myosins
108855242
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108855242
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108855242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
nSTAND3
AAA_16
AAA_22
AAA_19
CbiA
Motif
Other DBs
NCBI-GeneID:
108855242
NCBI-ProteinID:
XP_018484512
UniProt:
A0A6J0NIC9
LinkDB
All DBs
Position
4:48583200..48590700
Genome browser
AA seq
1276 aa
AA seq
DB search
MGENILVDSHVWVEDPETAWTHGVVLNIKGDEADVKTNDGTQVIAKLSKLYPKDDEAPSE
GVEDMTRLSYLHEPAVLNNLATRYELNEIYTYTGNILIAVNPFQGLPHLYDSEVMEKYKE
ASFKELSPHVFAIGGIAYREMINEDRNKCILVSGESGSGKTETTKMLMRYLAFFGGHTAG
EGRTVENQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDDVGRISGAAIRTYLLERS
RVCQVSDPERNYHCFYLLCAAPPEDVERFKLGDPKSFRYLNQSSCYELDGVNDAEEYLST
RKAMDVVGISETEQDAIFRVVAAILHLGNIEFCKGEDADSSSLKDEQSNFHLQMTSELLM
CDPHSLEDALCKRMMVTPEEVIKRSLDPLGAAVSRDGLAKTIYSRLFDWLVNKINISIGQ
DSNSRRLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQSEYEKEEIDWS
YVEFVDNKDVVDLIEKKPGGIIALLDETCMLPKSTPETFSEKLYQTFKNHKRFIKPKLTR
SDFTLVHYAGEVQYQSDQFLDKNKDYVVAEHQDLLNASKCSFVSGLFPPLPKASSKSKFS
SIGARFKLQLQQLMETLNLTEPHYIRCVKPNNLLQPTVFDNANVLHQLRSGGVLEAIRVK
CAGYPTNRTFIEFLKRFMILAPEILKGEYEADVACKWILDKKGLTGFQIGKSKVFLRAGQ
MAELDAHRTKVLGEAAKMIQGQVRTRLTRERYVLLRRASVNIQANWRANLARKISRYMRR
EEAAIKIQKNLRRQIAIKDYGNTKSSAVTLQSGVRTMVARHEFHYKLKSKAATKIQAYWR
GYSAVSDYKKLKKASLVYQSKLRGRIARKQLGQSNQAEKKKETEHERDVELSNPAEEAVD
KSFVKHSDESDDEEMRHKRETKHSIQEDDGIEKSFVKHSDESDDEEMGHERQNKQTIQGD
NGIEKSFVKHSDESDDEEMRHERETKHSIQEDDGIEKSFVKHSDESDDEKMGHERQNEQT
IQGDDGIEKSFVMHSDHSSDEEKGHEQQITHTIQADDGVEKSFVMHSDHSSDEDKGHERQ
KEHTIQADDGIEKSLILDSENPFSNFSDVSHITNPFRDTEVESLTAEVEMLKALLVVEKQ
RADISERKCDEARELGERRRKRLEETERRVYQLQDSLNRLLYSMSDQFSQLKSILRSPSM
SSTLASVPVVRDDLADSSENSEASSTESDFTFPAPSSSSADNPNQLQVIVQDLSTTEAKG
TENSDSKKKGGFEDYF
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagaacatattggtggattctcatgtctgggtggaagacccggagactgcttgg
actcatggggttgtgcttaatatcaagggagacgaagctgatgttaaaaccaatgatggt
acacaggttattgctaaactatcaaaactctatccaaaagacgatgaagctccttcagag
ggagtagaggacatgacaagattatcttatctccatgagcctgcagttctcaacaacttg
gctaccagatatgagctgaatgaaatttatacttatacaggaaacattcttattgctgtc
aatccctttcaaggactccctcatctttacgattctgaggttatggagaagtacaaggaa
gcctctttcaaagaattgagtcctcatgtttttgcaattggtggcattgcatatagggaa
atgatcaatgaggataggaataaatgtatattggtcagtggtgaaagtgggtctggaaag
acagagacgactaagatgctcatgcgttaccttgcattctttggaggccatactgcaggg
gaaggaaggacggttgaaaaccaagttttagaatcaaatccagttctcgaggcatttgga
aatgcgaagactgtgaagaacaacaattccagtcgttttgggaaatttgtggagattcag
tttgatgacgtgggtcggatatctggggcagccatcagaacctaccttttggagaggtct
cgtgtttgccaagtttcagatcctgaacgcaactatcactgcttttacctcctgtgtgct
gctcctccagaggatgttgagagatttaaattgggcgaccccaagtcgtttcggtatctt
aaccaatctagctgctacgaacttgatggtgtaaacgatgcagaggagtatctttctact
agaaaagctatggatgtagttggaataagtgaaacagaacaggatgcaattttcagagtt
gtggctgccattctccatcttggaaatattgaattttgcaagggagaagatgctgattca
tcatctctaaaagatgaacagtcaaattttcatctccaaatgacatcagaattgctcatg
tgtgatccccattccttagaagatgctttgtgtaagcgtatgatggtcaccccagaagaa
gttatcaaaagaagtcttgatcctcttggtgccgccgttagtagggatggtttagcaaag
acaatatattctagactctttgattggttggtaaacaaaataaatatctctatcggacaa
gattctaactctaggcgcttgattggagtccttgacatttatggttttgagagctttaaa
accaacagttttgaacaattctgtattaattacacgaatgaaaagctgcaacaacatttc
aaccagcatgtattcaaaatggaacaaagtgaatatgaaaaagaagaaatagattggagc
tatgtggagttcgttgataacaaagatgtcgtggatctaattgaaaagaagcccggtggt
atcattgctcttctagatgaaacatgcatgctacccaaatcaactcctgaaacattttct
gagaagctttatcaaacattcaagaatcataagcgctttattaaaccaaaactgactcga
tcagattttactttagttcattatgcaggggaggttcagtaccagtccgatcaattttta
gacaaaaacaaagactatgttgttgccgagcatcaggatttgttaaatgcttccaaatgt
tcttttgtgtcaggcctttttcctcctcttcctaaagcgagtagcaagtctaagttttcc
tctattggcgctcgtttcaagctacaattgcaacagctgatggagacgctgaatttaacg
gaaccacactacatcagatgtgttaagccaaacaatttgttgcagccaacagtgtttgac
aatgccaatgtcttgcatcagttacgctctgggggtgttcttgaggccatcagagtgaaa
tgcgctggatatccaacaaataggactttcatcgaattcttaaaacggtttatgattctt
gcaccggagattctgaaaggagagtatgaagcagatgttgcatgcaagtggattttggac
aaaaaggggctcacaggtttccaaattggtaaaagtaaagttttcctgagagctggtcag
atggctgagctagatgcacacagaacaaaagtgcttggtgaagcagcgaagatgattcaa
gggcaagttagaacccgtctcacaagagaacgatatgtgctcttgcggagggcttcagtt
aatatacaagctaattggagagcaaaccttgcacgaaagatatcaaggtacatgagaagg
gaggaagctgccattaaaattcagaaaaacttacgtagacagattgcgattaaagattat
gggaataccaaatcttcggcagtcacattgcaaagtggagtccggacaatggttgcacgc
catgagttccattataaattgaagtctaaggcagcgactaagatccaggcctactggcgt
ggttacagtgctgtatctgactacaagaaactgaaaaaagcttctcttgtttatcaaagt
aaactcagaggaagaattgctagaaaacaattgggacagtcaaatcaggctgagaaaaag
aaagagacggaacatgaaagagatgtggaactttccaatccagcagaagaggcagttgat
aagtcctttgtaaagcattcagatgaaagtgatgatgaagagatgagacataaaagagag
acaaaacattcaatccaagaagatgatggcattgaaaagtcctttgtaaagcattcagat
gagagtgatgatgaagagatgggacatgaacgacagaataaacagaccatccaaggagat
aatggaattgaaaagtcctttgtaaagcattcagatgaaagtgatgatgaagagatgaga
catgaaagagagacaaaacattcaatccaagaagatgatggcattgaaaagtcctttgta
aagcattcagatgagagtgatgatgaaaagatgggtcatgaacgacagaatgaacagacc
atccaaggagatgatggaattgaaaagtcctttgtaatgcattcagaccatagtagtgat
gaagagaaaggacatgaacaacagataacacataccatccaagcagatgatggagttgaa
aagtcctttgtaatgcattcagaccatagtagtgatgaagataaaggacatgaacgacag
aaagagcataccatccaagcagatgatggaattgaaaagtcattgattctggattcagag
aaccctttcagcaatttttctgatgtaagccatataacgaaccctttccgtgatacagaa
gttgagtcccttactgccgaagttgagatgttgaaggccttgttggtagttgagaaacag
agagctgacatttccgaaagaaaatgtgatgaagcacgagaacttggtgagagaagacgc
aaaagattagaagaaacagaaagacgagtttaccaactacaagactctttgaacaggttg
ttatattctatgtcggaccagttctctcaactgaagtccatcctgagatctccttccatg
tcttcaacgttggcttcagtgcccgtcgtacgtgatgatcttgctgacagctctgagaac
tctgaagcttcatcgactgaatctgatttcacatttccagctccatcttcttcttctgca
gataatccaaatcagctgcaagttattgttcaagatctatcaaccacagaggccaaagga
acagagaactctgacagtaagaagaaagggggctttgaagattacttttga
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integrated database retrieval system
