Raphanus sativus (radish): 108855293
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Entry
108855293 CDS
T06014
Name
(RefSeq) polygalacturonate 4-alpha-galacturonosyltransferase isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00520
Amino sugar and nucleotide sugar metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108855293
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108855293
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108855293
Glycosyltransferases [BR:
rsz01003
]
Polysaccharide
Structural polysaccharide
108855293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF6488
Motif
Other DBs
NCBI-GeneID:
108855293
NCBI-ProteinID:
XP_018484570
UniProt:
A0A6J0NKD5
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All DBs
Position
4:complement(51772424..51775632)
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AA seq
675 aa
AA seq
DB search
MALKRGLTGVNRIRGGGGGGSRSAVVILVFLCVLAPLIFFVGRGVYFDSSSNDYSNASSV
KQSLVDWRERLAMRSLRSLFSKEVLDVITASTADLGPFSLDSFKKNNLSPSWRQVEEVDT
SFKQNQTTSSIVNAKRDTTTTSKGGSHQKVETPEKLYRRQLREKRRERRANELVQHNDDT
ILKLENAAIERSKSVDSAVLGKYSIWRRENDNDNSDSNIRLMRDQVIMARVYSGLAKLKK
NKTDLFQELQARIKDSQRVLGESTTDADLPRSAHDKLRDMGQVLSKAKMQLYDCKLVTGK
LRAMLQTADEQVRSLKKQSTFLAQLAAKTIPNAIHCLSMRLTIDYYLLSPEKRKFPRSEY
LENPNLYHYALFSDNVLAASVVVNSTIMNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPG
KATIHVENVDEFKWLNSSYCPVLRQLESAAMKEFYFKADHPTSGSSNLKYRNPKYLSMLN
HLRFYLPEVYPKLNKILFLDDDIIVQKDLTPLWEVNLNGKVNGAVETCGESFHRFDKYLN
FSNPHIARNFNPNACGWAYGMNMFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLPPGL
ITFYGLTHPLNKAWHVLGLGYNPSIAKKDIENAAVVHYNGNMKPWLELAMSKYRPYWTKY
IQFDHPYLRRCNLHE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaagcgaggattaaccggagttaaccggattagaggaggaggaggaggtgga
tctcgatctgcagttgtgatcctcgtctttctatgtgtgttggcacctctcatcttcttc
gttggtcgtggagtatacttcgattcctcctctaacgactattcaaatgctagttctgtg
aagcagagtcttgtggactggagagagcgcttagctatgcgatctcttagatctcttttc
tctaaagaggtactagatgttatcacagctagcacagctgatttgggtccttttagcctt
gattctttcaagaaaaacaatttgtctccatcatggcgtcaagtggaggaagtagacacc
tcctttaagcagaatcagacaacatctagtatcgttaatgcaaaacgtgacactactact
acttcaaaaggtggcagccatcagaaagttgagacacctgaaaagttatacagaaggcaa
ctaagagagaaaagacgtgagaggcgagctaacgagttagttcagcacaatgacgacacc
attttgaaactcgaaaatgcggccatcgaacgctccaagtctgttgattctgcagtcctt
ggaaaatacagtatctggagaagagagaacgacaacgacaactctgattctaatatacgt
ttgatgagggatcaagtgatcatggctagagtctatagtggtctcgcaaagctgaagaag
aacaagactgacttgtttcaagagctccaggcccggattaaagacagccaacgtgttttg
ggtgaatcaacaaccgatgcagatcttcctcggagtgcacatgataaactgagagacatg
ggtcaagtcttgtctaaagctaagatgcagttgtatgactgcaagctggttactggaaag
ctgagagcaatgcttcaaaccgctgatgaacaagtcaggagcttgaagaagcagagtact
tttctggctcagttagctgccaaaaccattccaaatgctatccattgcctgtcgatgcgc
ttgaccatcgattactatcttctttctccggagaaacgaaagttccctcgcagtgaatac
ctagagaaccctaatctttaccattatgccttgttttctgacaacgtgttagctgcatca
gtggttgttaactcaaccatcatgaacgccaaggatccttcgaagcatgtgtttcacctt
gtgacggataaactcaacttcggagcaatgaacatgtggttcctcctaaacccacctgga
aaggcaaccatacacgtggaaaacgtggacgagtttaagtggctcaactcatcttactgc
cctgttcttcgtcagcttgaatctgcagcaatgaaggaattctatttcaaagcagatcat
ccaacttcaggctcttccaatctcaaatacagaaacccaaagtacctctccatgttgaat
cacttgagattctacctccctgaggtttatcccaagctgaacaaaatcctcttcctggac
gacgacatcatcgtccagaaagacctgactccactctgggaagtcaacctgaacggcaaa
gtcaacggagcggtcgaaacctgcggggagagtttccacaggttcgacaagtatctcaac
ttctcgaaccctcacatcgcgaggaacttcaatccaaacgcatgtggatgggcttatggg
atgaacatgttcgacctaaaggagtggaagaagagagacatcactggtatctaccataag
tggcaaaacatgaatgagaacaggacactatggaagctagggacactaccaccaggatta
ataacgttttacggattaacacatcctttgaacaaggcgtggcacgtgctgggacttgga
tataacccgagtatcgctaagaaggacattgagaatgcagcagtggttcactataacggg
aacatgaaaccgtggttggagttggctatgtccaagtatcgaccgtattggaccaagtat
atccagtttgatcacccttatcttcgtcgatgcaaccttcatgaataa
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