Raphanus sativus (radish): 108855329
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Entry
108855329 CDS
T06014
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108855329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108855329
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108855329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
108855329
NCBI-ProteinID:
XP_018484625
UniProt:
A0A6J0NKK3
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All DBs
Position
4:complement(4031707..4034479)
Genome browser
AA seq
485 aa
AA seq
DB search
MEQKMETVSDLGKLFIGGISWDTDEERLREYFSKYGDLVESVIMRDRTTGRARGFGFIVF
ADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISSPSHGGGNNNGRTK
KIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK
TFHELNGKMVEVKRAVPKEQPSSSAAPLAGSNRSSPVIGYGGNNNYGGVVVQPNRSSGGG
NSYFNSFAPGYNSNNNNIGPPGSRFSPIGSGRNAFSSSNFGLGLNQELSLMNSSFDGNAI
GYNNRMIHGNQYFNSGGGGASPNRYNSPIGFNRGDSAYNPSNRDLLWGNRTDSSGGPGWN
LGVSVGNNNRGNWGLSDTNGYGRSFGASSGLSALSFSGGNNNNNTNGFDGSIGELYRGSS
VYSDSTWQQGLPHHQSSNELDGLSRSYGFGFDNVAVSDPTGNASEGYPGSYSVGGNRQTN
RGIEA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaagatggaaacggtgtcggatctggggaagctcttcattggcgggatttca
tgggacacggacgaagaacggcttcgagagtattttagcaagtacggtgacttggtcgag
tctgtgatcatgcgtgaccgtaccacgggacgtgcacgtggctttggtttcatcgtcttt
gcagatccttctgttgctgagagagtcatcatggacaaacacatcatcgatggccgcacg
gtggaggccaagaaagctgtgccacgtgatgatcagcaagtgctgaaacgacacgcgagt
ccaatgcaccttatctcatcacctagccacggtggtggtaacaacaacgggagaaccaag
aagatcttcgttggaggtttaccatcgagcatcaccgaagccgagttcaagaactacttt
gaccagttcggtacgatcgcagacgttgtggtgatgtacgatcacaacacgcagaggcca
cgtggctttggattcatcacttttgattcagaagagtctgtcgacatggttcttcacaag
accttccacgagctaaacggcaaaatggtcgaggttaaaagagcagtgccgaaggagcag
ccttcctcctcagcagctcctcttgctggttctaaccgaagcagcccggttattgggtat
ggtggtaataacaactatggaggagtagtggtacaacctaataggtcatctggtggtggt
aatagctacttcaatagttttgctcctggttataatagtaacaacaacaacataggccct
cctggttctaggtttagtcctattggtagcggtaggaatgctttctcttctagtaacttt
ggtcttggtctgaaccaagaactgagtctgatgaactcaagctttgatggaaacgctatt
ggttataataaccggatgatccatgggaaccaatacttcaacagtggtggtggtggtgct
tcgccaaaccgttacaactctccgataggattcaacagaggcgactctgcttacaaccca
agcaatagagacttgttgtggggaaacaggacagactcttctggtggtccaggttggaac
ttgggtgtctctgttggtaacaacaacagaggaaactggggactttctgatactaatggc
tatgggagaagctttggagcaagttctggactttctgcgttatcattctctggtggtaac
aacaacaacaacacaaatggttttgatgggtccataggggaactgtacagagggagctcg
gtttatagcgactcaacgtggcagcaggggttgcctcatcatcagtcttctaatgagtta
gacggcttgtctcgctcttatggctttggttttgacaatgtagccgtctcagacccaact
ggtaatgcctctgaaggttaccccggaagttacagtgttggagggaatagacaaacgaat
agaggtattgaagcatag
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integrated database retrieval system
