Raphanus sativus (radish): 108855355
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Entry
108855355 CDS
T06014
Name
(RefSeq) poly(ADP-ribose) glycohydrolase 1
KO
K07759
poly(ADP-ribose) glycohydrolase [EC:
3.2.1.143
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108855355
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.143 poly(ADP-ribose) glycohydrolase
108855355
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GFIT
Motif
Pfam:
PARG_cat_C
PARG_cat_N
Motif
Other DBs
NCBI-GeneID:
108855355
NCBI-ProteinID:
XP_018484660
UniProt:
A0A6J0NJC0
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Position
4:complement(37713472..37717251)
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AA seq
559 aa
AA seq
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MENREDLNSILPYLPLLIRSSSLYWPPRVVEALKAMSEGPSHSRVDSGEVLWQAISDMRR
SLSLSARLLAPSAPQGYALLFDELIRGEDSKRWFDEVVPALARLLLQLPSLLETHFRSAD
GVVGGVETGLRLLEPQQAGIIFLSQELIGALLACAFFCLFPVSTRGAKDLPVINFDHLFA
SLYESYSESHESKIRCIMHYFERVCSCMPTGTVSFERKILPAEYHTSSTTAHDADFWSKS
DISLCAFKVHSSGLIEDQSDNALEVDFANKYLGGGALNRGCVQEEIRFMINPELIAGMLF
LARMDDNEAIEIVGAERFSCYTGYASSFRFTGDYIDKKTMDAFRRRRTRIVAIDALCAPK
MRHFKETCILREINKALCGFLIQRKSWQNQSIFIDKEDSEMQLASDDKDSDLMDTETSTS
HGAPVNDVETNREKHVGSFVRDFCGEGSNCMDHEDVGVATGNWGCGVFGGDPELKAMIQW
LATSQARRPFISYYTFGTQALENLDQVTKWIISHDWTVGDLWNMMLEYSAQRLYKQTNLG
FFSWLLPSLYTTNEAISPS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgggaagatctcaactccattctcccctacctcccgcttctcatccgctct
tcatcactctactggccaccgcgcgtggtggaggccctaaaggccatgtccgaaggccca
tctcacagccgagtcgactcgggagaagttctgtggcaagctatttccgatatgaggcga
tcactttccctatcagctcgccttcttgccccttctgctcctcaaggctacgcccttctc
ttcgacgaactgattcgtggggaagattcgaagagatggttcgatgaggttgtaccggcg
ttggcgaggttgctccttcagcttccgtctttgttggaaacgcattttcggagtgctgat
ggtgttgttggtggggtggagacgggtttgcgtttgttagagccccaacaagctggcata
attttcctcagccaggagttaattggagctcttctggcgtgtgccttcttttgtttgttt
ccagtttctactagaggtgcaaaagatcttccagtcatcaactttgatcatttgtttgcg
agcctttatgaaagttatagtgaaagtcatgaaagcaagatacggtgtattatgcattac
ttcgaaagggtgtgctcctgcatgcccactgggactgtttcatttgaacgcaagattctt
ccagctgaataccacacttcttctaccactgctcatgacgctgatttttggagcaagtct
gacatctccctttgtgcttttaaggttcactcttccgggcttatagaagatcaatctgac
aatgctctggaagtggacttcgcaaacaagtatcttggaggtggtgccctgaataggggg
tgcgtgcaggaggagatacgcttcatgatcaaccctgaactaatcgctggcatgcttttc
ttggctcgcatggatgacaatgaagctatagaaatagttggtgcagaaagattttcatgt
tacacagggtatgcatcttcatttcggtttactggtgactacattgacaagaagactatg
gatgctttcagaaggcgaagaaccagaattgttgcaatagatgcattatgtgccccgaag
atgagacattttaaagaaacgtgcattttgcgggagattaacaaggctctatgtggcttt
ttaattcaaaggaaatcttggcagaaccagagtatattcatagacaaagaagacagtgaa
atgcagcttgccagtgacgacaaagattctgatctcatggatacagaaacctctacgtca
catggagctccagtaaatgatgtcgagacaaatagagagaagcatgttggcagttttgta
agagatttttgtggggaaggatccaattgcatggatcatgaagatgttggtgtggcgact
ggtaattggggatgtggtgtttttggaggagacccagaactaaaagctatgatccagtgg
cttgctacttcccaggcgcggagaccatttatatcatactacacttttggaacacaggcc
ctcgaaaacctagatcaggtgaccaagtggattatttcccatgattggaccgttggagat
ctctggaacatgatgctagaatattctgctcaaaggctgtacaagcaaacaaatcttggc
ttcttctcttggctacttccatctctatataccaccaatgaggctatctcgccgtcttga
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